RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 GJB5O95377 273 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 ARL13AQ5H913 290 aaPredicted RBP13.62□□□□□ -0.23
NPC1-201ENST00000269228 ZFP1Q6P2D0 407 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.62□□□□□ -0.233e-7■■■■□ 25.1
NPC1-201ENST00000269228 C16orf62Q7Z3J2 963 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 VN1R5Q7Z5H4 357 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 GATAD2AQ86YP4 633 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 ZNF276Q8N554 614 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 ESAMQ96AP7 390 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 PPCDCQ96CD2 204 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 TRIT1Q9H3H1 467 aaKnown RBP13.62□□□□□ -0.23
NPC1-201ENST00000269228 PDLIM7Q9NR12 457 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 DUSP12Q9UNI6 340 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 ZNF232Q9UNY5 417 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 LTBP4Q8N2S1 1624 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 MAGEA13PA6NCF6 341 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 GABRDO14764 452 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 NR2F1P10589 423 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 CDH5P33151 784 aaPredicted RBP13.61□□□□□ -0.23
NPC1-201ENST00000269228 DGKEP52429 567 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 GRM2Q14416 872 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 CCDC142Q17RM4 750 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 GPAT3Q53EU6 434 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 BHLHB9Q6PI77 547 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 C12orf76Q8N812 135 aaPredicted RBP13.61□□□□□ -0.23
NPC1-201ENST00000269228 NAT8LQ8N9F0 302 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 SPAG4Q9NPE6 437 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 PTGESO14684 152 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 WNT9AO14904 365 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 ANXA6P08133 673 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 GNPDA1P46926 289 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 TOMM20Q15388 145 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 SIRPB2Q5JXA9 342 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 ZYG11AQ6WRX3 759 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 TMEM130Q8N3G9 435 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 TSTD1Q8NFU3 115 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 LCN9Q8WX39 176 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 SIPA1Q96FS4 1042 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 RBM47A0AV96 593 aaKnown RBP13.61□□□□□ -0.23
NPC1-201ENST00000269228 COCHO43405 550 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 PLIN3O60664 434 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 CLCQ05315 142 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 OASLQ15646 514 aaKnown RBP13.61□□□□□ -0.23
NPC1-201ENST00000269228 RTP2Q5QGT7 225 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 CLEC6AQ6EIG7 209 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 LYSMD3Q7Z3D4 306 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 SNX20Q7Z614 316 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 ZDHHC13Q8IUH4 622 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 RIBC2Q9H4K1 309 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 ZDHHC4Q9NPG8 344 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 FNIP2Q9P278 1114 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 SLC17A6Q9P2U8 582 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 VPS4AQ9UN37 437 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 SRRM3A6NNA2 597 aaPredicted RBP13.61□□□□□ -0.23
NPC1-201ENST00000269228 UBXN8O00124 270 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 CLDN9O95484 217 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 COPZ1P61923 177 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 ZDHHC24Q6UX98 284 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 CASP12Q6UXS9 341 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 FSTL5Q8N475 847 aaPredicted RBP13.61□□□□□ -0.23
NPC1-201ENST00000269228 REEP1Q9H902 201 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 CCDC177Q9NQR7 707 aaPredicted RBP13.61□□□□□ -0.23
NPC1-201ENST00000269228 BATF3Q9NR55 127 aa13.61□□□□□ -0.23
NPC1-201ENST00000269228 INTS7Q9NVH2 962 aaKnown RBP13.61□□□□□ -0.23
NPC1-201ENST00000269228 AKT2P31751 481 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 RXRGP48443 463 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 ZNF132P52740 706 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 PITX1P78337 314 aaPredicted RBP13.6□□□□□ -0.23
NPC1-201ENST00000269228 SLC9A4Q6AI14 798 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 NAPRTQ6XQN6 538 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 C14orf80Q86SX3 495 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 C19orf60Q96EN9 201 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 HBEGFQ99075 208 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 LRTM1Q9HBL6 345 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 ZNF780BQ9Y6R6 833 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.6□□□□□ -0.23
NPC1-201ENST00000269228 C2orf71A6NGG8 1288 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 CLOCKO15516 846 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 KRT75O95678 551 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 CCNHP51946 323 aaPredicted RBP13.6□□□□□ -0.23
NPC1-201ENST00000269228 PAFAH1B3Q15102 231 aaKnown RBP13.6□□□□□ -0.23
NPC1-201ENST00000269228 LDLRAP1Q5SW96 308 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 CMTR2Q8IYT2 770 aaKnown RBP13.6□□□□□ -0.23
NPC1-201ENST00000269228 CYP4Z2PQ8N1L4 340 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 GLIS1Q8NBF1 620 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 NUS1Q96E22 293 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 IL12RB2Q99665 862 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 RIOK2Q9BVS4 552 aaKnown RBP13.6□□□□□ -0.23
NPC1-201ENST00000269228 TBC1D10AQ9BXI6 508 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 MRPS33Q9Y291 106 aaKnown RBP13.6□□□□□ -0.23
NPC1-201ENST00000269228 C4AP0C0L4 1744 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 PRR5-ARHGAP8B1AHC4 643 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 RHOP08100 348 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 WNT7BP56706 349 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 ARHGAP8P85298 464 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 SLC30A9Q6PML9 568 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 GPRIN1Q7Z2K8 1008 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 UNC5BQ8IZJ1 945 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 TWIST2Q8WVJ9 160 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 INTS10Q9NVR2 710 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms