RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 SPATA16Q9BXB7 569 aa13.98□□□□□ -0.17
SS18-201ENST00000269137 OXSMQ9NWU1 459 aa13.98□□□□□ -0.17
SS18-201ENST00000269137 CPSF2Q9P2I0 782 aaKnown RBP13.98□□□□□ -0.17
SS18-201ENST00000269137 XPR1Q9UBH6 696 aa13.98□□□□□ -0.17
SS18-201ENST00000269137 TRMT6Q9UJA5 497 aaKnown RBP13.98□□□□□ -0.17
SS18-201ENST00000269137 TMPRSS11EQ9UL52 423 aa13.98□□□□□ -0.17
SS18-201ENST00000269137 ITM2BQ9Y287 266 aa13.98□□□□□ -0.17
SS18-201ENST00000269137 PRUNE2Q8WUY3 3088 aa13.98□□□□□ -0.17
SS18-201ENST00000269137 WNT9AO14904 365 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 TRIM13O60858 407 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 H2AFYO75367 372 aaKnown RBP13.97□□□□□ -0.17
SS18-201ENST00000269137 RALBP11234 206 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 CD1DP15813 335 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 C5AR1P21730 350 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 CLCN7P51798 805 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 MRPS21P82921 87 aaKnown RBP13.97□□□□□ -0.17
SS18-201ENST00000269137 CNTN1Q12860 1018 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 STX3Q13277 289 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 C2orf27AQ580R0 203 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 PIP5KL1Q5T9C9 394 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 CES4AQ5XG92 561 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 PTRHD1Q6GMV3 140 aaKnown RBP13.97□□□□□ -0.17
SS18-201ENST00000269137 CGB2Q6NT52 195 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 ZNF765Q7L2R6 523 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 ISCA2Q86U28 154 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 NKAPQ8N5F7 415 aaKnown RBP13.97□□□□□ -0.17
SS18-201ENST00000269137 IL17RCQ8NAC3 791 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 OR2T3Q8NH03 318 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 CD200R1Q8TD46 325 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 DTD2Q96FN9 168 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 SEC16BQ96JE7 1060 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 C7orf26Q96N11 449 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 RIOK2Q9BVS4 552 aaKnown RBP13.97□□□□□ -0.17
SS18-201ENST00000269137 DERL2Q9GZP9 239 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 ABCG8Q9H221 673 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 SLC2A4RGQ9NR83 387 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 THAP1Q9NVV9 213 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 CD84Q9UIB8 345 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 DHRS7Q9Y394 339 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 MTF2Q9Y483 593 aaPredicted RBP13.97□□□□□ -0.17
SS18-201ENST00000269137 LRRK1Q38SD2 2015 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 CCDC189A1A4V9 331 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 E5RI56 91 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 PLK4O00444 970 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 AP1G1O43747 822 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 ASGR2P07307 311 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 C7P10643 843 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 FOSL2P15408 326 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 CHRM3P20309 590 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 DRD3P35462 400 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 ATP6V0D1P61421 351 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 OCRLQ01968 901 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 CCDC15Q0P6D6 951 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 STARD3Q14849 445 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 ACOX1Q15067 660 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 ZNF284Q2VY69 593 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 GPRC6AQ5T6X5 926 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 ZNF776Q68DI1 518 aaPredicted RBP13.97□□□□□ -0.17
SS18-201ENST00000269137 Q7L0L9 218 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 SPATA21Q7Z572 469 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 NLRP8Q86W28 1048 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 CACNA2D3Q8IZS8 1091 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 PPP1R14CQ8TAE6 165 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 CCDC97Q96F63 343 aaPredicted RBP13.97□□□□□ -0.17
SS18-201ENST00000269137 GUCD1Q96NT3 240 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 VPS35Q96QK1 796 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 WRAP53Q9BUR4 548 aaKnown RBP13.97□□□□□ -0.17
SS18-201ENST00000269137 TFB2MQ9H5Q4 396 aaKnown RBP13.97□□□□□ -0.17
SS18-201ENST00000269137 GALPQ9UBC7 116 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 FADS3Q9Y5Q0 445 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 PRSS21Q9Y6M0 314 aa13.97□□□□□ -0.17
SS18-201ENST00000269137 MID1O15344 667 aa13.96□□□□□ -0.17
SS18-201ENST00000269137 ADAM23O75077 832 aa13.96□□□□□ -0.17
SS18-201ENST00000269137 TGDSO95455 350 aa13.96□□□□□ -0.17
SS18-201ENST00000269137 TFEBP19484 476 aa13.96□□□□□ -0.17
SS18-201ENST00000269137 ATP5F1P24539 256 aaPredicted RBP13.96□□□□□ -0.17
SS18-201ENST00000269137 COPAP53621 1224 aa13.96□□□□□ -0.17
SS18-201ENST00000269137 RPS14P62263 151 aaKnown RBP13.96□□□□□ -0.17
SS18-201ENST00000269137 B4GALNT1Q00973 533 aa13.96□□□□□ -0.17
SS18-201ENST00000269137 FBXO43Q4G163 708 aa13.96□□□□□ -0.17
SS18-201ENST00000269137 LIPMQ5VYY2 423 aa13.96□□□□□ -0.17
SS18-201ENST00000269137 SPNS2Q8IVW8 549 aa13.96□□□□□ -0.17
SS18-201ENST00000269137 AADATQ8N5Z0 425 aa13.96□□□□□ -0.17
SS18-201ENST00000269137 CLDN19Q8N6F1 224 aa13.96□□□□□ -0.17
SS18-201ENST00000269137 SIDT2Q8NBJ9 832 aaKnown RBP13.96□□□□□ -0.17
SS18-201ENST00000269137 CCDC197Q8NCU1 140 aa13.96□□□□□ -0.17
SS18-201ENST00000269137 GIMAP7Q8NHV1 300 aa13.96□□□□□ -0.17
SS18-201ENST00000269137 RHEBL1Q8TAI7 183 aa13.96□□□□□ -0.17
SS18-201ENST00000269137 PPM1EQ8WY54 764 aa13.96□□□□□ -0.17
SS18-201ENST00000269137 INPP5DQ92835 1189 aa13.96□□□□□ -0.17
SS18-201ENST00000269137 FAM136AQ96C01 138 aa13.96□□□□□ -0.17
SS18-201ENST00000269137 AP2M1Q96CW1 435 aa13.96□□□□□ -0.17
SS18-201ENST00000269137 PDLIM5Q96HC4 596 aaKnown RBP13.96□□□□□ -0.17
SS18-201ENST00000269137 SLC30A3Q99726 388 aa13.96□□□□□ -0.17
SS18-201ENST00000269137 UNKQ9C0B0 810 aaKnown RBP13.96□□□□□ -0.17
SS18-201ENST00000269137 LATS2Q9NRM7 1088 aa13.96□□□□□ -0.17
SS18-201ENST00000269137 KLHL42Q9P2K6 505 aa13.96□□□□□ -0.17
SS18-201ENST00000269137 A0A1W2PQF6 199 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 SHISA7A6NL88 538 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 NEMP1O14524 444 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms