RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 TAS2R42Q7RTR8 314 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 ISCA2Q86U28 154 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 TSPAN33Q86UF1 283 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 PIM3Q86V86 326 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 SERPINA9Q86WD7 417 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 FITM2Q8N6M3 262 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 TMIEQ8NEW7 156 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 PRSS33Q8NF86 280 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 ULK4Q96C45 1275 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 LRRC37BQ96QE4 947 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 TMEM120AQ9BXJ8 343 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 FOXQ1Q9C009 403 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 WWP1Q9H0M0 922 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 ASB8Q9H765 288 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 PKD2L2Q9NZM6 624 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 SLC12A4Q9UP95 1085 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 CACNA1IQ9P0X4 2223 aa15.23■□□□□ 0.03
COPS3-201ENST00000268717 DMDP11532 3685 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 ZNF106Q9H2Y7 1883 aaKnown RBP15.22■□□□□ 0.03
COPS3-201ENST00000268717 A0A0G2JND7 137 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 KANSL1LA0AUZ9 987 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 SHISA7A6NL88 538 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 ITM2AO43736 263 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 CTSLP07711 333 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 CHRM1P11229 460 aaPredicted RBP15.22■□□□□ 0.03
COPS3-201ENST00000268717 TFEBP19484 476 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 OPRD1P41143 372 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 SPINT3P49223 89 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 MESP2Q0VG99 397 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 SF3A3Q12874 501 aaKnown RBP eCLIP15.22■□□□□ 0.03
COPS3-201ENST00000268717 ARHGEF7Q14155 803 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 RCN2Q14257 317 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 CRY1Q16526 586 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 SETMARQ53H47 684 aaPredicted RBP15.22■□□□□ 0.03
COPS3-201ENST00000268717 ARSIQ5FYB1 569 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 FAM91A1Q658Y4 838 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 NAPRTQ6XQN6 538 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 KIRREL3Q8IZU9 778 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 PJA1Q8NG27 643 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 CLPBQ9H078 707 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 SMOXQ9NWM0 555 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 NCKIPSDQ9NZQ3 722 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 TRMT6Q9UJA5 497 aaKnown RBP15.22■□□□□ 0.03
COPS3-201ENST00000268717 GNPTGQ9UJJ9 305 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 DCTN4Q9UJW0 460 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 DNAJC16Q9Y2G8 782 aa15.22■□□□□ 0.03
COPS3-201ENST00000268717 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.22■□□□□ 0.03
COPS3-201ENST00000268717 MYO15AQ9UKN7 3530 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 PSMD11O00231 422 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 OR1I1O60431 355 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 IPO13O94829 963 aaKnown RBP15.21■□□□□ 0.03
COPS3-201ENST00000268717 HSPA4LO95757 839 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 C1SP09871 688 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 TIMP2P16035 220 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 GJA4P35212 333 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 GALNT1Q10472 559 aaPredicted RBP15.21■□□□□ 0.03
COPS3-201ENST00000268717 ELAVL3Q14576 367 aaKnown RBP15.21■□□□□ 0.03
COPS3-201ENST00000268717 FNDC3BQ53EP0 1204 aaKnown RBP15.21■□□□□ 0.03
COPS3-201ENST00000268717 NUDT18Q6ZVK8 323 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 DPPA4Q7L190 304 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 NXPE1Q8N323 547 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 SPATA6LQ8N4H0 392 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 GPR26Q8NDV2 337 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 CD200R1Q8TD46 325 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 OR8D1Q8WZ84 308 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 KIAA1191Q96A73 305 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 THOC1Q96FV9 657 aaKnown RBP15.21■□□□□ 0.03
COPS3-201ENST00000268717 PDLIM5Q96HC4 596 aaKnown RBP15.21■□□□□ 0.03
COPS3-201ENST00000268717 GPR21Q99679 349 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 TRMOQ9BU70 441 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 TMEM245Q9H330 911 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 LTB4R2Q9NPC1 389 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 KLHL42Q9P2K6 505 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 CRLS1Q9UJA2 301 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 RAP2CQ9Y3L5 183 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 SIT1Q9Y3P8 196 aa15.21■□□□□ 0.03
COPS3-201ENST00000268717 IGLV3-16A0A075B6K0 115 aa15.21■□□□□ 0.02
COPS3-201ENST00000268717 A8MT66 165 aa15.21■□□□□ 0.02
COPS3-201ENST00000268717 MUC22E2RYF6 1773 aaPredicted RBP15.21■□□□□ 0.02
COPS3-201ENST00000268717 SLCO1B7G3V0H7 640 aa15.21■□□□□ 0.02
COPS3-201ENST00000268717 GALR2O43603 387 aaPredicted RBP15.21■□□□□ 0.02
COPS3-201ENST00000268717 KERAO60938 352 aa15.21■□□□□ 0.02
COPS3-201ENST00000268717 LYPLA1O75608 230 aaPredicted RBP15.21■□□□□ 0.02
COPS3-201ENST00000268717 CD72P21854 359 aa15.21■□□□□ 0.02
COPS3-201ENST00000268717 ITGB7P26010 798 aa15.21■□□□□ 0.02
COPS3-201ENST00000268717 ARRB2P32121 409 aa15.21■□□□□ 0.02
COPS3-201ENST00000268717 GRIA2P42262 883 aa15.21■□□□□ 0.02
COPS3-201ENST00000268717 NAA20P61599 178 aa15.21■□□□□ 0.02
COPS3-201ENST00000268717 TCF15Q12870 199 aa15.21■□□□□ 0.02
COPS3-201ENST00000268717 BNIP1Q12981 228 aa15.21■□□□□ 0.02
COPS3-201ENST00000268717 PRKAA1Q13131 559 aa15.21■□□□□ 0.02
COPS3-201ENST00000268717 CHRNA6Q15825 494 aa15.21■□□□□ 0.02
COPS3-201ENST00000268717 C9orf64Q5T6V5 341 aa15.21■□□□□ 0.02
COPS3-201ENST00000268717 ERAP2Q6P179 960 aa15.21■□□□□ 0.02
COPS3-201ENST00000268717 PAQR3Q6TCH7 311 aa15.21■□□□□ 0.02
COPS3-201ENST00000268717 ZNF852Q6ZMS4 543 aa15.21■□□□□ 0.02
COPS3-201ENST00000268717 MACC1Q6ZN28 852 aa15.21■□□□□ 0.02
COPS3-201ENST00000268717 TXNDC5Q8NBS9 432 aaKnown RBP15.21■□□□□ 0.02
COPS3-201ENST00000268717 CSGALNACT1Q8TDX6 532 aa15.21■□□□□ 0.02
COPS3-201ENST00000268717 SKA1Q96BD8 255 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms