RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 C18orf21Q32NC0 220 aaPredicted RBP12.3□□□□□ -0.44
CHMP3-201ENST00000263856 HACD2Q6Y1H2 254 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 AGMOQ6ZNB7 445 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 SCD5Q86SK9 330 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 SYVN1Q86TM6 617 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 CENPSQ8N2Z9 138 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 PGBD5Q8N414 524 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 ZC3H15Q8WU90 426 aaKnown RBP12.3□□□□□ -0.44
CHMP3-201ENST00000263856 TMBIM1Q969X1 311 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 BDH2Q9BUT1 245 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 THUMPD3Q9BV44 507 aaKnown RBP12.3□□□□□ -0.44
CHMP3-201ENST00000263856 PRG3Q9Y2Y8 225 aaPredicted RBP12.3□□□□□ -0.44
CHMP3-201ENST00000263856 OAS3Q9Y6K5 1087 aaKnown RBP12.3□□□□□ -0.44
CHMP3-201ENST00000263856 A0A1W2PP18 115 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 RBM47A0AV96 593 aaKnown RBP12.3□□□□□ -0.44
CHMP3-201ENST00000263856 MBLAC1A4D2B0 266 aaPredicted RBP12.3□□□□□ -0.44
CHMP3-201ENST00000263856 IQCF5A8MTL0 148 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 FAM155AB1AL88 458 aaPredicted RBP12.3□□□□□ -0.44
CHMP3-201ENST00000263856 SCAMP3O14828 347 aaKnown RBP12.3□□□□□ -0.44
CHMP3-201ENST00000263856 LDB2O43679 373 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 RAMP2O60895 175 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 NIPSNAP2O75323 286 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 GUCA1CO95843 209 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 GPIP06744 558 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 FCGR1AP12314 374 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 HSD17B1P14061 328 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 PRKACGP22612 351 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 DNAJB1P25685 340 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 ZNF135P52742 658 aaPredicted RBP12.3□□□□□ -0.44
CHMP3-201ENST00000263856 C8orf82Q6P1X6 216 aaPredicted RBP12.3□□□□□ -0.44
CHMP3-201ENST00000263856 IL27RAQ6UWB1 636 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 PLEKHH3Q7Z736 793 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 FAM126BQ8IXS8 530 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 THEM5Q8N1Q8 247 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 SIDT2Q8NBJ9 832 aaKnown RBP12.3□□□□□ -0.44
CHMP3-201ENST00000263856 OR4K2Q8NGD2 314 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 STAG3L4Q8TBR4 150 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 IGSF8Q969P0 613 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 COX4I2Q96KJ9 171 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 GLT1D1Q96MS3 346 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 SDR39U1Q9NRG7 319 aaPredicted RBP12.3□□□□□ -0.44
CHMP3-201ENST00000263856 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.3□□□□□ -0.44
CHMP3-201ENST00000263856 ASB1Q9Y576 335 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 PCDHA9Q9Y5H5 950 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 CORINQ9Y5Q5 1042 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 PDE4DIPQ5VU43 2346 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 CNPP09543 421 aaKnown RBP12.29□□□□□ -0.44
CHMP3-201ENST00000263856 CYP2C18P33260 490 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 MTHFRP42898 656 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 RAD51Q06609 339 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 TGFBIQ15582 683 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 MEP1AQ16819 746 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 ZRANB3Q5FWF4 1079 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 EGFLAMQ63HQ2 1017 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 SPESP1Q6UW49 350 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 CCDC81Q6ZN84 652 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 PIWIL3Q7Z3Z3 882 aaKnown RBP12.29□□□□□ -0.44
CHMP3-201ENST00000263856 OR52B6Q8NGF0 335 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 ZYG11BQ9C0D3 744 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 ABCD2Q9UBJ2 740 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 LIMD1Q9UGP4 676 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 LEF1Q9UJU2 399 aaPredicted RBP12.29□□□□□ -0.44
CHMP3-201ENST00000263856 PAIP2BQ9ULR5 123 aaKnown RBP12.29□□□□□ -0.44
CHMP3-201ENST00000263856 POLR3HQ9Y535 204 aaPredicted RBP12.29□□□□□ -0.44
CHMP3-201ENST00000263856 KANSL1LA0AUZ9 987 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 ASPDHA6ND91 283 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 CFAP99D6REC4 459 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 E5RI56 91 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 FFAR3O14843 346 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 MUSKO15146 869 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 GPR42O15529 346 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 OR1I1O60431 355 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 MMP2P08253 660 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 TCF3P15923 654 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 FDXRP22570 491 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 CD52P31358 61 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 MLLT6P55198 1093 aaPredicted RBP12.29□□□□□ -0.44
CHMP3-201ENST00000263856 NFATC3Q12968 1075 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 UPP1Q16831 310 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 C10orf120Q5SQS8 335 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 KANK2Q63ZY3 851 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 CXCL17Q6UXB2 119 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 TAS2R42Q7RTR8 314 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 MILR1Q7Z6M3 343 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 TBC1D21Q8IYX1 336 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 PACRGLQ8N7B6 248 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 OR2T11Q8NH01 316 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 OSCP1Q8WVF1 389 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 ITCHQ96J02 903 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 TAS2R13Q9NYV9 303 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 GMIPQ9P107 970 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 AASSQ9UDR5 926 aa12.29□□□□□ -0.44
CHMP3-201ENST00000263856 HS6ST1O60243 411 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 HTR6P50406 440 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 CREB5Q02930 508 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 CHRNB3Q05901 458 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 FOXD4Q12950 439 aaPredicted RBP12.28□□□□□ -0.44
CHMP3-201ENST00000263856 LAPTM4AQ15012 233 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 AASDHQ4L235 1098 aaPredicted RBP12.28□□□□□ -0.44
CHMP3-201ENST00000263856 CCNYL2Q5T2Q4 361 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms