RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 CRTC3Q6UUV7 619 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 CHSY3Q70JA7 882 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 SLCO6A1Q86UG4 719 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 BRSK1Q8TDC3 778 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 NAT14Q8WUY8 206 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 NTAN1Q96AB6 310 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 DNAJC1Q96KC8 554 aaKnown RBP10.68□□□□□ -0.7
CD44-201ENST00000263398 MIOSQ9NXC5 875 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 NDOR1Q9UHB4 597 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 SLC7A8Q9UHI5 535 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 CCDC182A6NF36 153 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 CCL22O00626 93 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 ITPKAP23677 461 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 LMO2P25791 158 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 IL1R2P27930 398 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 RCVRNP35243 200 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 CAPGP40121 348 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 MANFP55145 182 aaKnown RBP10.68□□□□□ -0.7
CD44-201ENST00000263398 IL10RBQ08334 325 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 ITGA7Q13683 1181 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 ZBTB2Q8N680 514 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 DCBLD1Q8N8Z6 715 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 MOSPD2Q8NHP6 518 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 TEX47Q8TBZ9 253 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 CSGALNACT1Q8TDX6 532 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 EBF4Q9BQW3 602 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 CHID1Q9BWS9 393 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 NUSAP1Q9BXS6 441 aaKnown RBP10.68□□□□□ -0.7
CD44-201ENST00000263398 H0Y858 1186 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 RGS10O43665 173 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 C22orf31O95567 290 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 ESR1P03372 595 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 ASLP04424 464 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 OGNP20774 298 aaKnown RBP10.68□□□□□ -0.7
CD44-201ENST00000263398 HSPA7P48741 367 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 RPIAP49247 311 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 PEX6Q13608 980 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 SLC9A5Q14940 896 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 PRKD1Q15139 912 aaPredicted RBP10.68□□□□□ -0.7
CD44-201ENST00000263398 QPRTQ15274 297 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 KLHL12Q53G59 568 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 FAM46CQ5VWP2 391 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 RFWD3Q6PCD5 774 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 C17orf64Q86WR6 236 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 OR4A15Q8NGL6 344 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 HM13Q8TCT9 377 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 CAPSLQ8WWF8 208 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 CXorf40BQ96DE9 158 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 ACAT2Q9BWD1 397 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 SGK2Q9HBY8 427 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 BCKDKO14874 412 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 USP2O75604 605 aaPredicted RBP10.68□□□□□ -0.7
CD44-201ENST00000263398 ANGPTL1O95841 491 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 BUD31P41223 144 aaPredicted RBP10.68□□□□□ -0.7
CD44-201ENST00000263398 ATXN1P54253 815 aaKnown RBP10.68□□□□□ -0.7
CD44-201ENST00000263398 NDUFA5Q16718 116 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 SLC35G1Q2M3R5 365 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 MPPE1Q53F39 396 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 DEF8Q6ZN54 512 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 KRT74Q7RTS7 529 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 LRTOMTQ8WZ04 291 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 FCRL5Q96RD9 977 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 COQ7Q99807 217 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 CXorf21Q9HAI6 301 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 PLK2Q9NYY3 685 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 EVLQ9UI08 416 aaPredicted RBP10.68□□□□□ -0.7
CD44-201ENST00000263398 PCDHGC4Q9Y5F7 938 aa10.68□□□□□ -0.7
CD44-201ENST00000263398 CCDC189A1A4V9 331 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 KLRG2A4D1S0 409 aaPredicted RBP10.67□□□□□ -0.7
CD44-201ENST00000263398 CDK14O94921 469 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 GOT2P00505 430 aaKnown RBP10.67□□□□□ -0.7
CD44-201ENST00000263398 AQP1P29972 269 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 FLT3LGP49771 235 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 CDH4P55283 916 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 DMPKQ09013 629 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 ADGRE1Q14246 886 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 CWF19L1Q69YN2 538 aaKnown RBP10.67□□□□□ -0.7
CD44-201ENST00000263398 RGMBQ6NW40 437 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 TMEM110Q86TL2 294 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 RAVER1Q8IY67 606 aaKnown RBP10.67□□□□□ -0.7
CD44-201ENST00000263398 OR7D4Q8NG98 312 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 DCAKDQ8WVC6 231 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 PDP1Q9P0J1 537 aaPredicted RBP10.67□□□□□ -0.7
CD44-201ENST00000263398 ATRNL1Q5VV63 1379 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 RGPD1P0DJD0 1748 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 H3BM21 787 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 INSIG1O15503 277 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 SLC28A2O43868 658 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 DUSP11O75319 330 aaKnown RBP10.67□□□□□ -0.7
CD44-201ENST00000263398 TBX10O75333 385 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 OR4F21O95013 312 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 PRAMEF1O95521 474 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 FGBP02675 491 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 MT-ND1P03886 318 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 UGT2B4P06133 528 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 ENO2P09104 434 aaPredicted RBP10.67□□□□□ -0.7
CD44-201ENST00000263398 CCNYL3P0C7X3 344 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 CTSEP14091 401 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 AQP4P55087 323 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 TCEA2Q15560 299 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms