RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 DGKBQ9Y6T7 804 aa9.06□□□□□ -0.96
MSH4-201ENST00000263187 A0A087WXM4 84 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 ACOX3O15254 700 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 SNX2O60749 519 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 SLC22A3O75751 556 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 RSL1D1O76021 490 aaKnown RBP9.05□□□□□ -0.96
MSH4-201ENST00000263187 RPL9P32969 192 aaKnown RBP9.05□□□□□ -0.96
MSH4-201ENST00000263187 CYP2C18P33260 490 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 POLD2P49005 469 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 LCP2Q13094 533 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 TUSC3Q13454 348 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 MSANTD2Q6P1R3 559 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 C8orf82Q6P1X6 216 aaPredicted RBP9.05□□□□□ -0.96
MSH4-201ENST00000263187 IL27RAQ6UWB1 636 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 ABI1Q8IZP0 508 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 TRPV1Q8NER1 839 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 ROPN1LQ96C74 230 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 PLEKHG4BQ96PX9 1271 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 DGCR6LQ9BY27 220 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 POLR1EQ9GZS1 481 aaKnown RBP9.05□□□□□ -0.96
MSH4-201ENST00000263187 ING2Q9H160 280 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 ZFYVE28Q9HCC9 887 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 ZFP14Q9HCL3 533 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 PRM3Q9NNZ6 103 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 CNOT11Q9UKZ1 510 aaKnown RBP9.05□□□□□ -0.96
MSH4-201ENST00000263187 OAS3Q9Y6K5 1087 aaKnown RBP9.05□□□□□ -0.96
MSH4-201ENST00000263187 PTGES3LE9PB15 166 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 RPP40O75818 363 aaKnown RBP9.05□□□□□ -0.96
MSH4-201ENST00000263187 CAPNS1P04632 268 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 RHOQP17081 205 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 RPS9P46781 194 aaKnown RBP9.05□□□□□ -0.96
MSH4-201ENST00000263187 CCT8P50990 548 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 POLR2JP52435 117 aaKnown RBP9.05□□□□□ -0.96
MSH4-201ENST00000263187 HK3P52790 923 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 TPD52P55327 224 aaPredicted RBP9.05□□□□□ -0.96
MSH4-201ENST00000263187 ATP6V0D1P61421 351 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 GNA12Q03113 381 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 SLC44A4Q53GD3 710 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 SETMARQ53H47 684 aaPredicted RBP9.05□□□□□ -0.96
MSH4-201ENST00000263187 KANK2Q63ZY3 851 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 SNX29P2Q8IUI4 249 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 DCP1BQ8IZD4 617 aaKnown RBP9.05□□□□□ -0.96
MSH4-201ENST00000263187 TRPV3Q8NET8 790 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 MDGA1Q8NFP4 955 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 GABPB2Q8TAK5 448 aaPredicted RBP9.05□□□□□ -0.96
MSH4-201ENST00000263187 STAG3L4Q8TBR4 150 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 GIPC3Q8TF64 312 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 FUBP1Q96AE4 644 aaKnown RBP9.05□□□□□ -0.96
MSH4-201ENST00000263187 LINGO1Q96FE5 620 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 MYRFLQ96LU7 910 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 HOPXQ9BPY8 73 aaPredicted RBP9.05□□□□□ -0.96
MSH4-201ENST00000263187 AARSD1Q9BTE6 412 aaKnown RBP9.05□□□□□ -0.96
MSH4-201ENST00000263187 KATNAL1Q9BW62 490 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 CRISPLD1Q9H336 500 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 FANCEQ9HB96 536 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 TIMMDC1Q9NPL8 285 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 SDR39U1Q9NRG7 319 aaPredicted RBP9.05□□□□□ -0.96
MSH4-201ENST00000263187 SUN2Q9UH99 717 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 ANAPC2Q9UJX6 822 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 MED16Q9Y2X0 877 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 GPR45Q9Y5Y3 372 aa9.05□□□□□ -0.96
MSH4-201ENST00000263187 E5RI56 91 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 H3BMQ9 156 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 TNPO2O14787 897 aaKnown RBP9.04□□□□□ -0.96
MSH4-201ENST00000263187 LDLRP01130 860 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 PENKP01210 267 aaPredicted RBP9.04□□□□□ -0.96
MSH4-201ENST00000263187 G6PDP11413 515 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 CTPS1P17812 591 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 HOXC13P31276 330 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 PSMD8P48556 350 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 ACADVLP49748 655 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 GATMP50440 423 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 STC1P52823 247 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 PTGR1Q14914 329 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 USP41Q3LFD5 358 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 AFMIDQ63HM1 303 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 GLYATQ6IB77 296 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 ELMSAN1Q6PJG2 1045 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 LYSMD3Q7Z3D4 306 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 GPR180Q86V85 440 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 MON1AQ86VX9 555 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 ZC3H7AQ8IWR0 971 aaKnown RBP9.04□□□□□ -0.96
MSH4-201ENST00000263187 UMODL1-AS1Q8N2C9 162 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 METTL6Q8TCB7 284 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 COG8Q96MW5 612 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 TRMOQ9BU70 441 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 APOL5Q9BWW9 433 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 TDRD1Q9BXT4 1180 aaKnown RBP9.04□□□□□ -0.96
MSH4-201ENST00000263187 TRIM15Q9C019 465 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 CCDC90BQ9GZT6 254 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 ARNT2Q9HBZ2 717 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 ATP13A1Q9HD20 1204 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 ARMC1Q9NVT9 282 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 TAS2R13Q9NYV9 303 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 ACTR3BQ9P1U1 418 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 PCDH10Q9P2E7 1040 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 WARS2Q9UGM6 360 aaKnown RBP9.04□□□□□ -0.96
MSH4-201ENST00000263187 TLR6Q9Y2C9 796 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 PCDHA9Q9Y5H5 950 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 RALGAPA2Q2PPJ7 1873 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms