RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ZNF410Q86VK4 478 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 CDCA5Q96FF9 252 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 MFSD14AQ96MC6 490 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 CCDC115Q96NT0 180 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 CDK15Q96Q40 435 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 HSD17B14Q9BPX1 270 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 LRTM1Q9HBL6 345 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 SAMD4AQ9UPU9 718 aaKnown RBP11.99□□□□□ -0.49
SMG6-201ENST00000263073 TNFSF13BQ9Y275 285 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 SPATA31A5Q5VU36 1347 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 SPATA31A7Q8IWB4 1347 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 TTC24A2A3L6 582 aaPredicted RBP11.99□□□□□ -0.49
SMG6-201ENST00000263073 ABLIM1O14639 778 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 CCNDBP1O95273 360 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 SEMG2Q02383 582 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 ZBTB6Q15916 424 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 SMARCD3Q6STE5 483 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 PJA1Q8NG27 643 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 XAGE5Q8WWM1 108 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 ZNF354BQ96LW1 612 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 DSN1Q9H410 356 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 SEMA3GQ9NS98 782 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 PFDN2Q9UHV9 154 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 DNMT3LQ9UJW3 386 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 AP3M1Q9Y2T2 418 aa11.99□□□□□ -0.49
SMG6-201ENST00000263073 NDUFS2O75306 463 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 OR4F21O95013 312 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 SIDT2Q8NBJ9 832 aaKnown RBP11.98□□□□□ -0.49
SMG6-201ENST00000263073 TBX5Q99593 518 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 SOHLH2Q9NX45 425 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 PDE10AQ9Y233 779 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 BBIP1A8MTZ0 92 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 A8MV72 311 aaPredicted RBP11.98□□□□□ -0.49
SMG6-201ENST00000263073 MAFO75444 373 aaPredicted RBP11.98□□□□□ -0.49
SMG6-201ENST00000263073 ZNF432O94892 652 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 CXCL17Q6UXB2 119 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 ZNF730Q6ZMV8 503 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 ADAMTSL2Q86TH1 951 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 UNC93AQ86WB7 457 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 PTCD2Q8WV60 388 aaKnown RBP11.98□□□□□ -0.49
SMG6-201ENST00000263073 AHCYL2Q96HN2 611 aaKnown RBP11.98□□□□□ -0.49
SMG6-201ENST00000263073 C12orf4Q9NQ89 552 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 DNAAF2Q9NVR5 837 aaKnown RBP11.98□□□□□ -0.49
SMG6-201ENST00000263073 SMIM30A4D0T7 59 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 ADAMTS3O15072 1205 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 TGDSO95455 350 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 TOP3BO95985 862 aaKnown RBP11.98□□□□□ -0.49
SMG6-201ENST00000263073 DHFRP00374 187 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 TCEA1P23193 301 aaKnown RBP11.98□□□□□ -0.49
SMG6-201ENST00000263073 JAM2P57087 298 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 BTG3Q14201 252 aaPredicted RBP11.98□□□□□ -0.49
SMG6-201ENST00000263073 GANABQ14697 944 aaKnown RBP11.98□□□□□ -0.49
SMG6-201ENST00000263073 GPR153Q6NV75 609 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 ULK3Q6PHR2 472 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 OR10Q1Q8NGQ4 319 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 GLOD4Q9HC38 313 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 GIN1Q9NXP7 522 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 COMMD3Q9UBI1 195 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 TRPV2Q9Y5S1 764 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 SH3D21A4FU49 640 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 EI24O14681 340 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 AXIN1O15169 862 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 SMIM10L2AP0DMW4 78 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 SMIM10L2BP0DMW5 78 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 RHBDL3P58872 404 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 POLR2LP62875 67 aaKnown RBP11.98□□□□□ -0.49
SMG6-201ENST00000263073 PHC1P78364 1004 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 MC1RQ01726 317 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 LAPTM5Q13571 262 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 TTC29Q8NA56 475 aaPredicted RBP11.98□□□□□ -0.49
SMG6-201ENST00000263073 CXorf40AQ8TE69 158 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 HEXDCQ8WVB3 486 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 ARMC5Q96C12 935 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 CORO2BQ9UQ03 480 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 MYOCOSA0A1B0GUC4 107 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 ISM1B1AKI9 464 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 CCRL2O00421 344 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 RPN2P04844 631 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 PGRP06401 933 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 FCER2P06734 321 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 TFPTP0C1Z6 253 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 UGT1A6P19224 532 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 UGT1A1P22309 533 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 UGT1A4P22310 534 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 MMP8P22894 467 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 UGT1A3P35503 534 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 UGT1A5P35504 534 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 ZNF567Q8N184 647 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 GATA5Q9BWX5 397 aaPredicted RBP11.98□□□□□ -0.49
SMG6-201ENST00000263073 PIGUQ9H490 435 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 IPPKQ9H8X2 491 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 ASF1AQ9Y294 204 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 UBIAD1Q9Y5Z9 338 aa11.98□□□□□ -0.49
SMG6-201ENST00000263073 SLIT1O75093 1534 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 TRBV23OR9-2A0A075B6M9 112 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 GSAPA4D1B5 854 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 TBC1D3BA6NDS4 549 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 CLDN25C9JDP6 229 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 CCNE2O96020 404 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 CHRNB2P17787 502 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms