RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 OTCP00480 354 aa8.28□□□□□ -1.08
SNCAIP-201ENST00000261367 BMP1P13497 986 aa8.28□□□□□ -1.08
SNCAIP-201ENST00000261367 CREB1P16220 341 aa8.28□□□□□ -1.08
SNCAIP-201ENST00000261367 CDH15P55291 814 aa8.28□□□□□ -1.08
SNCAIP-201ENST00000261367 EVX2Q03828 476 aa8.28□□□□□ -1.08
SNCAIP-201ENST00000261367 RHEBQ15382 184 aa8.28□□□□□ -1.08
SNCAIP-201ENST00000261367 SNAPC1Q16533 368 aa8.28□□□□□ -1.08
SNCAIP-201ENST00000261367 NEPROQ6NW34 567 aa8.28□□□□□ -1.08
SNCAIP-201ENST00000261367 GPRIN3Q6ZVF9 776 aa8.28□□□□□ -1.08
SNCAIP-201ENST00000261367 FIBCD1Q8N539 461 aa8.28□□□□□ -1.08
SNCAIP-201ENST00000261367 GDPD1Q8N9F7 314 aa8.28□□□□□ -1.08
SNCAIP-201ENST00000261367 KLHL6Q8WZ60 621 aa8.28□□□□□ -1.08
SNCAIP-201ENST00000261367 SH3YL1Q96HL8 342 aaPredicted RBP8.28□□□□□ -1.08
SNCAIP-201ENST00000261367 GAD1Q99259 594 aa8.28□□□□□ -1.08
SNCAIP-201ENST00000261367 DHRS9Q9BPW9 319 aa8.28□□□□□ -1.08
SNCAIP-201ENST00000261367 DSN1Q9H410 356 aa8.28□□□□□ -1.08
SNCAIP-201ENST00000261367 GCATO75600 419 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 CPSF4O95639 269 aaKnown RBP8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 CCNYL3P0C7X3 344 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 ERVK-10P10266 1014 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 KLRC2P26717 231 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 ALDH6A1Q02252 535 aaKnown RBP8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 GALEQ14376 348 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 USF2Q15853 346 aaPredicted RBP8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 GPRC6AQ5T6X5 926 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 ARSKQ6UWY0 536 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 SLC7A5P1Q8MH63 180 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 SLC34A3Q8N130 599 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 ZNF655Q8N720 491 aaPredicted RBP8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 CCDC115Q96NT0 180 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 BBS4Q96RK4 519 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 APBA2Q99767 749 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 IFT27Q9BW83 186 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 MAT2BQ9NZL9 334 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 EBF1Q9UH73 591 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 OAZ3Q9UMX2 235 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 SNX6Q9UNH7 406 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 LOC100130705A0A1B0GUX0 176 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 C2orf71A6NGG8 1288 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 MAGP20916 626 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 RPL19P84098 196 aaKnown RBP8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 GAD2Q05329 585 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 ABRQ12979 859 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 CLCA4Q14CN2 919 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 ADNP2Q6IQ32 1131 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 SLC26A9Q7LBE3 791 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 VWA5B2Q8N398 1253 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 OR13J1Q8NGT2 312 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 SLC7A14Q8TBB6 771 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 RFKQ969G6 155 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 ASIC4Q96FT7 647 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 FAM84BQ96KN1 310 aaPredicted RBP8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 EXOC2Q96KP1 924 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 CPVLQ9H3G5 476 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 PIF1Q9H611 641 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 PAK1IP1Q9NWT1 392 aaPredicted RBP8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 ZNRF3Q9ULT6 936 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 FAM234BA2RU67 622 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 ANKRD63C9JTQ0 380 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 CHP2O43745 196 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 GMDSO60547 372 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 OR56A5P0C7T3 313 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 POLR2CP19387 275 aaPredicted RBP8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 PRDX5P30044 214 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 FAPQ12884 760 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 SNAPC2Q13487 334 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 CYP2A13Q16696 494 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 COL28A1Q2UY09 1125 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 DCAF4L1Q3SXM0 396 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 RABL3Q5HYI8 236 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 COQ5Q5HYK3 327 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 KANK2Q63ZY3 851 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 RETREG3Q86VR2 466 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 PTGR2Q8N8N7 351 aaPredicted RBP8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 GALNT11Q8NCW6 608 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 CPB2Q96IY4 423 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 MARK4Q96L34 752 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 FAM193BQ96PV7 902 aaPredicted RBP8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 NPLQ9BXD5 320 aaPredicted RBP8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 WDR55Q9H6Y2 383 aaPredicted RBP8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 SMURF2Q9HAU4 748 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 TMEM45AQ9NWC5 275 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 PLEKHA6Q9Y2H5 1048 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 BCL9LQ86UU0 1499 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 INMT-MINDY4F8WBC2 141 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 RFPL1O75677 317 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 RFPL3O75679 317 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 KDM4BO94953 1096 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 SERPINA3P01011 423 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 CPB1P15086 417 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 ECHS1P30084 290 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 DNAJA1P31689 397 aaKnown RBP8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 CTBP2P56545 445 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 DSTNP60981 165 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 RPA4Q13156 261 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 SMAD1Q15797 465 aaKnown RBP8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 SHROOM1Q2M3G4 852 aaPredicted RBP8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 SYTL3Q4VX76 610 aa8.27□□□□□ -1.09
SNCAIP-201ENST00000261367 HES5Q5TA89 166 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms