RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 TM9SF3Q9HD45 589 aa15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 AASDHPPTQ9NRN7 309 aa15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 PHPT1Q9NRX4 125 aaPredicted RBP15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 PLAAQ9Y263 795 aa15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 ATXN2Q99700 1313 aaKnown RBP15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 SPAG17Q6Q759 2223 aa15.64■□□□□ 0.09
CCDC90B-201ENST00000260054 A0A1W2PR77 199 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 POC1B-GALNT4F8VUJ3 575 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 NDUFS3O75489 264 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 WNT1P04628 370 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 RACK1P63244 317 aaKnown RBP15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 NAB1Q13506 487 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 PDE1CQ14123 709 aaPredicted RBP15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 SIM2Q14190 667 aaPredicted RBP15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 ITIH4Q14624 930 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 CASP8Q14790 479 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 RNF187Q5TA31 235 aaPredicted RBP15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 LAYNQ6UX15 382 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 PACS1Q6VY07 963 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 Q6ZSR6 202 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 GALNT7Q86SF2 657 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 ADGRG6Q86SQ4 1221 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 IQCKQ8N0W5 287 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 SLC44A1Q8WWI5 657 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 TTC1Q99614 292 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 CPNE1Q99829 537 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 MCMBPQ9BTE3 642 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 INTS10Q9NVR2 710 aaKnown RBP15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 NSMCE4AQ9NXX6 385 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 CRYL1Q9Y2S2 319 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 TMEM98Q9Y2Y6 226 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 NFS1Q9Y697 457 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 R4GN57 208 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 TMEM202A6NGA9 273 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 RHOBTB1O94844 696 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 HOXC4P09017 264 aaPredicted RBP15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 AKT1P31749 480 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 PPARGP37231 505 aaPredicted RBP15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 GP5P40197 560 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 KIAA1024LP59773 190 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 TMEM115Q12893 351 aaPredicted RBP15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 NFATC4Q14934 902 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 DOK6Q6PKX4 331 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 PRR23BQ6ZRT6 265 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 RBFAQ8N0V3 343 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 SLC22A18ASQ8N1D0 253 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 CLDN19Q8N6F1 224 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 DHRS4Q9BTZ2 278 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 P2RY12Q9H244 342 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 TRIM39Q9HCM9 518 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 GPR27Q9NS67 375 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 TMEM74BQ9NUR3 256 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 ATXN10Q9UBB4 475 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 PRSS21Q9Y6M0 314 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 CACNA1HO95180 2353 aa15.63■□□□□ 0.09
CCDC90B-201ENST00000260054 UBA6A0AVT1 1052 aaPredicted RBP15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 CACNB4O00305 520 aaPredicted RBP15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 TOR1BO14657 336 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 THEGLP0DJG4 465 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 ZNF7P17097 686 aaPredicted RBP15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 MSH3P20585 1137 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 CD38P28907 300 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 NSG1P42857 185 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 RABIFP47224 123 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 CD151P48509 253 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 POLD2P49005 469 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 EIF3BP55884 814 aaKnown RBP15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 YPEL5P62699 121 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 TCF15Q12870 199 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 KCTD16Q68DU8 428 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 ZNF549Q6P9A3 640 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 DET1Q7L5Y6 550 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 ZC3HC1Q86WB0 502 aaKnown RBP15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 RASGEF1AQ8N9B8 481 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 PRSS33Q8NF86 280 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 EPS8L3Q8TE67 593 aaKnown RBP15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 DCAKDQ8WVC6 231 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 DCUN1D1Q96GG9 259 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 ATXN7L3BQ96GX2 97 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 BIRC8Q96P09 236 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 ZIM3Q96PE6 472 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 CCDC77Q9BR77 488 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 OR2AG1Q9H205 316 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 TXNDC16Q9P2K2 825 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 FETUBQ9UGM5 382 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 FANCMQ8IYD8 2048 aa15.62■□□□□ 0.09
CCDC90B-201ENST00000260054 TNRC6BQ9UPQ9 1833 aaKnown RBP15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 DLL1O00548 723 aa15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 PRMT5O14744 637 aaPredicted RBP15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 PFDN6O15212 129 aa15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 BCAT2O15382 392 aaPredicted RBP15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 SGTAO43765 313 aa15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 CDK14O94921 469 aa15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 ASMTLO95671 621 aa15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 ATP1B2P14415 290 aaPredicted RBP15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 ZNF8P17098 575 aaPredicted RBP15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 FMO4P31512 558 aa15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 MSH2P43246 934 aa15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 SLCO1A2P46721 670 aa15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 CTSCP53634 463 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms