RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 CAPN1P07384 714 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 CHRM1P11229 460 aaPredicted RBP9.02□□□□□ -0.97
CKAP2-201ENST00000258607 ZNF37AP17032 561 aaPredicted RBP9.02□□□□□ -0.97
CKAP2-201ENST00000258607 ETV3P41162 512 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 AQP4P55087 323 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 RPL38P63173 70 aaKnown RBP9.02□□□□□ -0.97
CKAP2-201ENST00000258607 PTGR1Q14914 329 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 LAPTM4AQ15012 233 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 MTX3Q5HYI7 312 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 BNC2Q6ZN30 1099 aaPredicted RBP9.02□□□□□ -0.97
CKAP2-201ENST00000258607 GDPD5Q8WTR4 605 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 ZNF333Q96JL9 665 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 CIB1Q99828 191 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 DCLRE1BQ9H816 532 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 ARL15Q9NXU5 204 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 PHF24Q9UPV7 400 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 SIP14410 1827 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 CNOT1A5YKK6 2376 aaKnown RBP9.02□□□□□ -0.97
CKAP2-201ENST00000258607 A0A088AWK7 358 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 MATN2O00339 956 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 BIRC5O15392 142 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 NTRK1P04629 796 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 PKMP14618 531 aaKnown RBP9.02□□□□□ -0.97
CKAP2-201ENST00000258607 TYRP14679 529 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 CRABP2P29373 138 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 GCKP35557 465 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 DPP6P42658 865 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 DGKEP52429 567 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 IL2P60568 153 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 AP2B1P63010 937 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 ACOX1Q15067 660 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 RETSATQ6NUM9 610 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 CEP70Q8NHQ1 597 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 ITFG1Q8TB96 612 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 NCLNQ969V3 563 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 TEX37Q96LM6 180 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 LRGUKQ96M69 825 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 MTERF1Q99551 399 aaKnown RBP9.02□□□□□ -0.97
CKAP2-201ENST00000258607 C2orf49Q9BVC5 232 aaPredicted RBP9.02□□□□□ -0.97
CKAP2-201ENST00000258607 C1QTNF1Q9BXJ1 281 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 OSGEPL1Q9H4B0 414 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 GGA2Q9UJY4 613 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 INTS6Q9UL03 887 aaKnown RBP9.02□□□□□ -0.97
CKAP2-201ENST00000258607 PCDHGB4Q9UN71 923 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 PCDHGB5Q9Y5G0 923 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 SYNDIG1LA6NDD5 238 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 SRRM3A6NNA2 597 aaPredicted RBP9.01□□□□□ -0.97
CKAP2-201ENST00000258607 CDK14O94921 469 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 DNAJB1P25685 340 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 NFKBIAP25963 317 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 SOX9P48436 509 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 STC1P52823 247 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 MTPNP58546 118 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 RBBP5Q15291 538 aaKnown RBP9.01□□□□□ -0.97
CKAP2-201ENST00000258607 ZIK1Q3SY52 487 aaPredicted RBP9.01□□□□□ -0.97
CKAP2-201ENST00000258607 TECRLQ5HYJ1 363 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 BNIPLQ7Z465 357 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 SPPL2CQ8IUH8 684 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 SLC44A2Q8IWA5 706 aaPredicted RBP9.01□□□□□ -0.97
CKAP2-201ENST00000258607 KDM1BQ8NB78 822 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 ACMSDQ8TDX5 336 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 C19orf60Q96EN9 201 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 DRC3Q9H069 523 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 ALG2Q9H553 416 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 PLAGL1Q9UM63 463 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 POLR3HQ9Y535 204 aaPredicted RBP9.01□□□□□ -0.97
CKAP2-201ENST00000258607 DNAJC15Q9Y5T4 150 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 SQORQ9Y6N5 450 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 MYO16Q9Y6X6 1858 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 TBC1D3BA6NDS4 549 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 SDHDO14521 159 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 FGBP02675 491 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 HLA-DPA1P20036 260 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 AQP1P29972 269 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 PBX2P40425 430 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 HALP42357 657 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 UFM1P61960 85 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 CLCQ05315 142 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 CEACAM7Q14002 265 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 GRIN2CQ14957 1233 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 ATP13A5Q4VNC0 1218 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 C2orf27AQ580R0 203 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 C6orf52Q5T4I8 152 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 EPGNQ6UW88 154 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 TMEM150AQ86TG1 271 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 C11orf74Q86VG3 221 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 FAM20CQ8IXL6 584 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 FRMD1Q8N878 549 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 JPH3Q8WXH2 748 aaPredicted RBP9.01□□□□□ -0.97
CKAP2-201ENST00000258607 EME1Q96AY2 570 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 TSPAN17Q96FV3 270 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 PSKH2Q96QS6 385 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 PRKD2Q9BZL6 878 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 ACTR8Q9H981 624 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 ADAMTS6Q9UKP5 1117 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 ZNF711Q9Y462 761 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 RAD54BQ9Y620 910 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 COL4A6Q14031 1691 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 TRAV19A0A0A6YYK7 116 aa9.01□□□□□ -0.97
CKAP2-201ENST00000258607 A0A0J9YYE9 177 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms