RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 EIF2DP41214 584 aaKnown RBP13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 SLC1A6P48664 564 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 JAG1P78504 1218 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 TXNL4AP83876 142 aaKnown RBP13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 PRR5P85299 388 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 EPS8Q12929 822 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 MLF2Q15773 248 aaPredicted RBP13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 SLC14A2Q15849 920 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 RGS9BPQ6ZS82 235 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 HORMAD2Q8N7B1 307 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 PTGR2Q8N8N7 351 aaPredicted RBP13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 FAM46DQ8NEK8 389 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 RMND5BQ96G75 393 aaPredicted RBP13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 LMLNQ96KR4 655 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 PRMT1Q99873 361 aaKnown RBP13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 EPN3Q9H201 632 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 KCND1Q9NSA2 647 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 ZSCAN32Q9NX65 697 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 CYP8B1Q9UNU6 501 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 MYADML2A6NDP7 307 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 B4DGG1 531 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 MAP3K6O95382 1288 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 EEF1DP29692 281 aaKnown RBP13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 OR2T34Q8NGX1 318 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 CLSTN3Q9BQT9 956 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 ZDHHC5Q9C0B5 715 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 CCDC90BQ9GZT6 254 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 ADAM7Q9H2U9 754 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 RNF19AQ9NV58 838 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 CAPN6Q9Y6Q1 641 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 MYH3P11055 1940 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 IRGMA1A4Y4 181 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 CNOT3O75175 753 aaKnown RBP13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 VNN1O95497 513 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 IL12BP29460 328 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 HSD17B3P37058 310 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 HNF4AP41235 474 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 FAAP100Q0VG06 881 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 SIM2Q14190 667 aaPredicted RBP13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 HEPACAMQ14CZ8 416 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 EIPR1Q53HC9 387 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 DPP10Q8N608 796 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 FIBINQ8TAL6 211 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 CYP4F12Q9HCS2 524 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 TCF7L2Q9NQB0 619 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 ARHGEF3Q9NR81 526 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 LYARQ9NX58 379 aaKnown RBP13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 B4GALT7Q9UBV7 327 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 AK5Q9Y6K8 562 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 MFSD11O43934 449 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 CFHP08603 1231 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 GLRBP48167 497 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 BMPR2Q13873 1038 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.31□□□□□ -0.282e-11■■■■□ 20.1
PRPF38A-201ENST00000257181 LRRC70Q7Z2Q7 622 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 FUKQ8N0W3 1084 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 ZNF527Q8NB42 609 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 TRPV3Q8NET8 790 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 JOSD2Q8TAC2 188 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 TMEM74Q96NL1 305 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 KCTD14Q9BQ13 255 aaPredicted RBP13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 CCSER2Q9H7U1 834 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 USP29Q9HBJ7 922 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 NPHS2Q9NP85 383 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 LEF1Q9UJU2 399 aaPredicted RBP13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 SUFUQ9UMX1 484 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 SIT1Q9Y3P8 196 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 AP3D1O14617 1153 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 AKAP10O43572 662 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 ECI2O75521 394 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 CYP7B1O75881 506 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 CLDN9O95484 217 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 ARSFP54793 590 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 MEF2AQ02078 507 aaPredicted RBP13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 LARS2Q15031 903 aaKnown RBP13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 DPY19L1Q2PZI1 675 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 ZNF549Q6P9A3 640 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 BNC2Q6ZN30 1099 aaPredicted RBP13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 MBOAT1Q6ZNC8 495 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 SLC29A4Q7RTT9 530 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 MAFAQ8NHW3 353 aaPredicted RBP13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 SLITRK2Q9H156 845 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 RNF39Q9H2S5 420 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 B3GAT2Q9NPZ5 323 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 OR2AG2A6NM03 316 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 RIPK2O43353 540 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 COCHO43405 550 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 PAICSP22234 425 aaKnown RBP13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 ALAS2P22557 587 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 SLC8B1Q6J4K2 584 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 UNC5AQ6ZN44 842 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 CHST15Q7LFX5 561 aaPredicted RBP13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 PLD5Q8N7P1 536 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 SPATA7Q9P0W8 599 aa13.31□□□□□ -0.28
PRPF38A-201ENST00000257181 BBIP1A8MTZ0 92 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 H0YGN5 161 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 RRP8O43159 456 aaKnown RBP13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 ADSSP30520 456 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 IFI35P80217 286 aaPredicted RBP13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 CSTF1Q05048 431 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms