RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 ADAMTS15Q8TE58 950 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 TCF12Q99081 682 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 FANCEQ9HB96 536 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 HMGXB4Q9UGU5 601 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 ZNF510Q9Y2H8 683 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 AP3M1Q9Y2T2 418 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 RBM7Q9Y580 266 aaKnown RBP18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 MAFBQ9Y5Q3 323 aaPredicted RBP18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 MTHFRP42898 656 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 POLR2JP52435 117 aaKnown RBP18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 GDF10P55107 478 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 CA9Q16790 459 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 IL23RQ5VWK5 629 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 DNAJC11Q9NVH1 559 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 PCDHA2Q9Y5H9 948 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 GCATO75600 419 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 NDST3O95803 873 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 HNRNPH3P31942 346 aaKnown RBP18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 HSPB3Q12988 150 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 EIF1ADQ8N9N8 165 aaKnown RBP18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 JSRP1Q96MG2 331 aaPredicted RBP18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 C5orf60A6NFR6 353 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 SAP18O00422 153 aaKnown RBP18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 SLC43A3Q8NBI5 491 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 KCT2Q8NC54 265 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 AIF1LQ9BQI0 150 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 SYT17Q9BSW7 474 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 PDCD10Q9BUL8 212 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 SEC14L3Q9UDX4 400 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 ARL5AQ9Y689 179 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 SAGP10523 405 aaPredicted RBP18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 TSHRP16473 764 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 KLF10Q13118 480 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 MZT2AQ6P582 158 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 DAW1Q8N136 415 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 FAM110BQ8TC76 370 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 KLHL32Q96NJ5 620 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 SPATA31D1Q6ZQQ2 1576 aa18.57■□□□□ 0.56
SMARCC1-201ENST00000254480 FAM25EA8MYX2 175 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 GRIN2DO15399 1336 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 SSNA1O43805 119 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 PLOD3O60568 738 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 UGT2B17O75795 530 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 SNHG28P0DPA3 235 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 RPL3P39023 403 aaKnown RBP18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 SLC20A2Q08357 652 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 BNIP2Q12982 314 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 TIMM50Q3ZCQ8 353 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 TMEM63BQ5T3F8 832 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 ZMIZ2Q8NF64 920 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 DBF4BQ8NFT6 615 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 SNX27Q96L92 541 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 ROBO3Q96MS0 1386 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 YJEFN3A6XGL0 299 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 COL6A1P12109 1028 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 NR4A1P22736 598 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 RBBP4Q09028 425 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 ARL13AQ5H913 290 aaPredicted RBP18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 GLYATQ6IB77 296 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 SERPINA9Q86WD7 417 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 FCRL4Q96PJ5 515 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 TRNT1Q96Q11 434 aaKnown RBP18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 FAM92AA1XBS5 289 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 DHX15O43143 795 aaKnown RBP18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 OR1F1O43749 312 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 NCK1P16333 377 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 RHOQP17081 205 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 GJA1P17302 382 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 CRHR1P34998 444 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 PBX1P40424 430 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 CTSKP43235 329 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 GNPDA1P46926 289 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 PITRM1Q5JRX3 1037 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 SPRYD7Q5W111 196 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 FAM47BQ8NA70 645 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 CAPSLQ8WWF8 208 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 Q96MT0 163 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 SUCOQ9UBS9 1254 aaKnown RBP18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 PDE9AO76083 593 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 POU2F1P14859 743 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 TPP2P29144 1249 aaPredicted RBP18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 CHRNA4P43681 627 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 ATG14Q6ZNE5 492 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 FAM156AQ8NDB6 213 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 DHX33Q9H6R0 707 aaKnown RBP18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 C3orf14Q9HBI5 128 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 PDP1Q9P0J1 537 aaPredicted RBP18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 FER1L4A9Z1Z3 1794 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 INHAP05111 366 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 ZNF155Q12901 538 aaPredicted RBP18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 KLF1Q13351 362 aaPredicted RBP18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 TOP3AQ13472 1001 aaPredicted RBP18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 CPNE9Q8IYJ1 553 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 CDADC1Q9BWV3 514 aa18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 EIF2B4Q9UI10 523 aaKnown RBP18.56■□□□□ 0.56
SMARCC1-201ENST00000254480 A0A0G2JN53 185 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 ERVK-21P61565 698 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 ZNF730Q6ZMV8 503 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 CPSF7Q8N684 471 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms