RNA–Protein interactions for RNA: ENST00000254351.8

SDC1-201, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC1, Length 3,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-201ENST00000254351 ALOX12P18054 663 aa14.27□□□□□ -0.13
SDC1-201ENST00000254351 PAFAH1B3Q15102 231 aaKnown RBP14.27□□□□□ -0.13
SDC1-201ENST00000254351 TRIP4Q15650 581 aaPredicted RBP14.27□□□□□ -0.13
SDC1-201ENST00000254351 USP51Q70EK9 711 aa14.27□□□□□ -0.13
SDC1-201ENST00000254351 DTWD1Q8N5C7 304 aa14.27□□□□□ -0.13
SDC1-201ENST00000254351 MCOLN3Q8TDD5 553 aa14.27□□□□□ -0.13
SDC1-201ENST00000254351 C12orf42Q96LP6 360 aa14.27□□□□□ -0.13
SDC1-201ENST00000254351 TUBA1CQ9BQE3 449 aa14.27□□□□□ -0.13
SDC1-201ENST00000254351 HGH1Q9BTY7 390 aa14.27□□□□□ -0.13
SDC1-201ENST00000254351 WDR12Q9GZL7 423 aaKnown RBP14.27□□□□□ -0.13
SDC1-201ENST00000254351 AMBNQ9NP70 447 aa14.27□□□□□ -0.13
SDC1-201ENST00000254351 PRMT7Q9NVM4 692 aaPredicted RBP14.27□□□□□ -0.13
SDC1-201ENST00000254351 FAM118AQ9NWS6 357 aa14.27□□□□□ -0.13
SDC1-201ENST00000254351 TCRBV5S2A0A599 114 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 ASPDHA6ND91 283 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 SSX4O60224 188 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 ALPLP05186 524 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 FCGR1AP12314 374 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 HSD17B1P14061 328 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 HADHAP40939 763 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 ALDH3A2P51648 485 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 AGAP7PQ5VUJ5 663 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 MILR1Q7Z6M3 343 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 PLD3Q8IV08 490 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 DCP1BQ8IZD4 617 aaKnown RBP14.26□□□□□ -0.13
SDC1-201ENST00000254351 RORBQ92753 470 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 UBE2FQ969M7 185 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 NCLNQ969V3 563 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 WDCPQ9H6R7 721 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 IL37Q9NZH6 218 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 MARCH4Q9P2E8 410 aaPredicted RBP14.26□□□□□ -0.13
SDC1-201ENST00000254351 TBC1D14Q9P2M4 693 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 KLHL3Q9UH77 587 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 ENPP5Q9UJA9 477 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 SUPT3HB4E1H0 165 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 GSTA4O15217 222 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 UGT2B11O75310 529 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 USP2O75604 605 aaPredicted RBP14.26□□□□□ -0.13
SDC1-201ENST00000254351 SOAT2O75908 522 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 ENO2P09104 434 aaPredicted RBP14.26□□□□□ -0.13
SDC1-201ENST00000254351 DBTP11182 482 aaKnown RBP14.26□□□□□ -0.13
SDC1-201ENST00000254351 IMPDH1P20839 514 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 GSTM2P28161 218 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 BMPR1AP36894 532 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 ACADSBP45954 432 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 GPRIN1Q7Z2K8 1008 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 DEPDC4Q8N2C3 294 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 MINDY1Q8N5J2 469 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 OSCP1Q8WVF1 389 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 CTRCQ99895 268 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 THUMPD3Q9BV44 507 aaKnown RBP14.26□□□□□ -0.13
SDC1-201ENST00000254351 NXF3Q9H4D5 531 aaKnown RBP14.26□□□□□ -0.13
SDC1-201ENST00000254351 RBM22Q9NW64 420 aaKnown RBP eCLIP14.26□□□□□ -0.13
SDC1-201ENST00000254351 ABCD2Q9UBJ2 740 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 B3GNT3Q9Y2A9 372 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 A0A087X1B8 175 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 C16orf96A6NNT2 1141 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 NOTOA8MTQ0 251 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 RAD51BO15315 384 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 DNTTP04053 509 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 LBPP18428 481 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 AGTR2P50052 363 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 ARPP19P56211 112 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 CHRNB3Q05901 458 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 SKIV2LQ15477 1246 aaKnown RBP14.26□□□□□ -0.13
SDC1-201ENST00000254351 SOWAHCQ53LP3 525 aaPredicted RBP14.26□□□□□ -0.13
SDC1-201ENST00000254351 C9orf131Q5VYM1 1079 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 ISCA2Q86U28 154 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 MICU2Q8IYU8 434 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 TEPSINQ96N21 525 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 C17orf80Q9BSJ5 609 aa14.26□□□□□ -0.13
SDC1-201ENST00000254351 REXO4Q9GZR2 422 aaKnown RBP14.26□□□□□ -0.13
SDC1-201ENST00000254351 UBA6A0AVT1 1052 aaPredicted RBP14.25□□□□□ -0.13
SDC1-201ENST00000254351 DIRAS1O95057 198 aa14.25□□□□□ -0.13
SDC1-201ENST00000254351 CDH1P12830 882 aa14.25□□□□□ -0.13
SDC1-201ENST00000254351 ZNF37AP17032 561 aaPredicted RBP14.25□□□□□ -0.13
SDC1-201ENST00000254351 ARSDP51689 593 aa14.25□□□□□ -0.13
SDC1-201ENST00000254351 KPNA2P52292 529 aaKnown RBP14.25□□□□□ -0.13
SDC1-201ENST00000254351 TNFAIP1Q13829 316 aa14.25□□□□□ -0.13
SDC1-201ENST00000254351 PSMD5Q16401 504 aa14.25□□□□□ -0.13
SDC1-201ENST00000254351 ZDHHC17Q8IUH5 632 aa14.25□□□□□ -0.13
SDC1-201ENST00000254351 FNDC5Q8NAU1 212 aa14.25□□□□□ -0.13
SDC1-201ENST00000254351 KLHL5Q96PQ7 755 aa14.25□□□□□ -0.13
SDC1-201ENST00000254351 RIBC2Q9H4K1 309 aa14.25□□□□□ -0.13
SDC1-201ENST00000254351 ZBTB20Q9HC78 741 aaPredicted RBP14.25□□□□□ -0.13
SDC1-201ENST00000254351 FBXO10Q9UK96 956 aa14.25□□□□□ -0.13
SDC1-201ENST00000254351 UGT2A1Q9Y4X1 527 aa14.25□□□□□ -0.13
SDC1-201ENST00000254351 ZNF99A8MXY4 864 aaPredicted RBP14.25□□□□□ -0.13
SDC1-201ENST00000254351 GJB3O75712 270 aa14.25□□□□□ -0.13
SDC1-201ENST00000254351 MRPS15P82914 257 aaKnown RBP14.25□□□□□ -0.13
SDC1-201ENST00000254351 POU4F1Q01851 419 aa14.25□□□□□ -0.13
SDC1-201ENST00000254351 GPR162Q16538 588 aa14.25□□□□□ -0.13
SDC1-201ENST00000254351 DESI1Q6ICB0 168 aa14.25□□□□□ -0.13
SDC1-201ENST00000254351 ARMC8Q8IUR7 673 aa14.25□□□□□ -0.13
SDC1-201ENST00000254351 CELF2-AS1Q8N7Q2 184 aa14.25□□□□□ -0.13
SDC1-201ENST00000254351 SPATA17Q96L03 361 aa14.25□□□□□ -0.13
SDC1-201ENST00000254351 NEK6Q9HC98 313 aa14.25□□□□□ -0.13
SDC1-201ENST00000254351 TRIM39Q9HCM9 518 aa14.25□□□□□ -0.13
SDC1-201ENST00000254351 RGS18Q9NS28 235 aa14.25□□□□□ -0.13
SDC1-201ENST00000254351 NSMCE4AQ9NXX6 385 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms