RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 RCN3Q96D15 328 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 KIFC1Q9BW19 673 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 PIF1Q9H611 641 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 SGK2Q9HBY8 427 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 THSD7AQ9UPZ6 1657 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 PRPS2P11908 318 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 PSMA3P25788 255 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 DENND6AQ8IWF6 608 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 AGAP2Q99490 1192 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 TMEM79Q9BSE2 394 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 CLOCKO15516 846 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 SOCS5O75159 536 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 TSPAN8P19075 237 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 MYLK3Q32MK0 819 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 ZNF544Q6NX49 715 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 CYP2R1Q6VVX0 501 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 SCML4Q8N228 414 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 DCAKDQ8WVC6 231 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 PPCDCQ96CD2 204 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 PGAP3Q96FM1 320 aaPredicted RBP14.88□□□□□ -0.03
UBE4B-201ENST00000253251 RPL10LQ96L21 214 aaKnown RBP14.88□□□□□ -0.03
UBE4B-201ENST00000253251 OR52E6Q96RD3 313 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 CCDC177Q9NQR7 707 aaPredicted RBP14.88□□□□□ -0.03
UBE4B-201ENST00000253251 IMP3Q9NV31 184 aaKnown RBP14.88□□□□□ -0.03
UBE4B-201ENST00000253251 SOHLH2Q9NX45 425 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 ZNF490Q9ULM2 529 aaPredicted RBP14.88□□□□□ -0.03
UBE4B-201ENST00000253251 RFXANKO14593 260 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 CBSLP0DN79 551 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 SP100P23497 879 aaPredicted RBP14.88□□□□□ -0.03
UBE4B-201ENST00000253251 CBSP35520 551 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 UBAP2LQ14157 1087 aaKnown RBP14.88□□□□□ -0.03
UBE4B-201ENST00000253251 IRAK1BP1Q5VVH5 260 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 ERICH5Q6P6B1 374 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 STK32CQ86UX6 486 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 EFCAB3Q8N7B9 438 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 GPR62Q9BZJ7 368 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 VIPR1P32241 457 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 RNF148Q8N7C7 305 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 OR10T2Q8NGX3 314 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 GLMNQ92990 594 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 TRMT61BQ9BVS5 477 aaKnown RBP14.88□□□□□ -0.03
UBE4B-201ENST00000253251 CERS4Q9HA82 394 aa14.88□□□□□ -0.03
UBE4B-201ENST00000253251 MYH8P13535 1937 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 TM7SF2O76062 418 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 TNFAIP8O95379 198 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 GSTM1P09488 218 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 CRATP43155 626 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 CHRNA4P43681 627 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 TTC23Q5W5X9 447 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 TPRG1Q6ZUI0 275 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 ALYREFQ86V81 257 aaKnown RBP14.87□□□□□ -0.03
UBE4B-201ENST00000253251 UNC5BQ8IZJ1 945 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 CPSF7Q8N684 471 aaKnown RBP14.87□□□□□ -0.03
UBE4B-201ENST00000253251 PANX1Q96RD7 426 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 PRKAG3Q9UGI9 489 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 RAB23Q9ULC3 237 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 TPRKBQ9Y3C4 175 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 ANKRD66B4E2M5 251 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 PI15O43692 258 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 ACVRL1P37023 503 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 XIAPP98170 497 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 TRIM32Q13049 653 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 GTF2H2Q13888 395 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 C1DQ13901 141 aaKnown RBP14.87□□□□□ -0.03
UBE4B-201ENST00000253251 RAB33AQ14088 237 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 GTF2H2CQ6P1K8 395 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 FOXR1Q6PIV2 292 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 VITQ6UXI7 678 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 DHDDSQ86SQ9 333 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 DNAJB8Q8NHS0 232 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 PHF21AQ96BD5 680 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 LRIG1Q96JA1 1093 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 ZNF184Q99676 751 aaPredicted RBP14.87□□□□□ -0.03
UBE4B-201ENST00000253251 EXOSC4Q9NPD3 245 aaKnown RBP14.87□□□□□ -0.03
UBE4B-201ENST00000253251 A0A0J9YYE9 177 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 J3KR12 359 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 HS6ST1O60243 411 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 AKT2P31751 481 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 INO80DQ53TQ3 878 aaPredicted RBP14.87□□□□□ -0.03
UBE4B-201ENST00000253251 MED27Q6P2C8 311 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 LDB1Q86U70 411 aaPredicted RBP14.87□□□□□ -0.03
UBE4B-201ENST00000253251 SEC14L1Q92503 715 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 TPD52L3Q96J77 140 aa14.87□□□□□ -0.03
UBE4B-201ENST00000253251 MARF1Q9Y4F3 1742 aaKnown RBP14.87□□□□□ -0.03
UBE4B-201ENST00000253251 LEFTY2O00292 366 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 VIPP01282 170 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 TRPC1P48995 793 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 AP1S2P56377 157 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 MRPS22P82650 360 aaKnown RBP14.86□□□□□ -0.03
UBE4B-201ENST00000253251 NAE1Q13564 534 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 TMEM220Q6QAJ8 160 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 CASP12Q6UXS9 341 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 CPNE9Q8IYJ1 553 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 SPACA7Q96KW9 195 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 TOX2Q96NM4 488 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 USP29Q9HBJ7 922 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 PCDH12Q9NPG4 1184 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 SEMA3GQ9NS98 782 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 FLRT1Q9NZU1 646 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 PCDHGA11Q9Y5H2 935 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms