RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 H7C0S8 307 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 KMOO15229 486 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 LDB2O43679 373 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 KIF5CO60282 957 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 CEP104O60308 925 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 SRP72O76094 671 aaKnown RBP12.61□□□□□ -0.39
VPREB3-201ENST00000248948 ECEL1O95672 775 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 RPLP0P05388 317 aaKnown RBP12.61□□□□□ -0.39
VPREB3-201ENST00000248948 GPR3P46089 330 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 PDX1P52945 283 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 MAZP56270 477 aaKnown RBP12.61□□□□□ -0.39
VPREB3-201ENST00000248948 CDH17Q12864 832 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 NFATC2Q13469 925 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 SPARCL1Q14515 664 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 CHRNA6Q15825 494 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 LONRF2Q1L5Z9 754 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 INSCQ1MX18 579 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 KHDC1Q4VXA5 237 aaKnown RBP12.61□□□□□ -0.39
VPREB3-201ENST00000248948 GPRC6AQ5T6X5 926 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 CRTC3Q6UUV7 619 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 MARCH9Q86YJ5 346 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 SFTPA2Q8IWL1 248 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 REXO1L1PQ8IX06 675 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 RASGEF1CQ8N431 466 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 SFRP1Q8N474 314 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 ARL14Q8N4G2 192 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 OR4K2Q8NGD2 314 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 PBKQ96KB5 322 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 GFM1Q96RP9 751 aaKnown RBP12.61□□□□□ -0.39
VPREB3-201ENST00000248948 NAP1L3Q99457 506 aaPredicted RBP12.61□□□□□ -0.39
VPREB3-201ENST00000248948 STN1Q9H668 368 aaKnown RBP12.61□□□□□ -0.39
VPREB3-201ENST00000248948 LRIT1Q9P2V4 623 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 TMPRSS11EQ9UL52 423 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 TTC7AQ9ULT0 858 aaPredicted RBP12.61□□□□□ -0.39
VPREB3-201ENST00000248948 KCNK6Q9Y257 313 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 DRG1Q9Y295 367 aaKnown RBP12.61□□□□□ -0.39
VPREB3-201ENST00000248948 DMXL2Q8TDJ6 3036 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 KIR2DS5A0A0G2JLQ3 304 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 A0A0G2JNG1 304 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 KLHL33A6NCF5 533 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 PRR19A6NJB7 356 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 OR5K4A6NMS3 321 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 RHPN2P1A8MT19 583 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 E7EVH7 732 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 KIR2DS3K7RE56 304 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 CES2O00748 559 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 ZZEF1O43149 2961 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 GPR39O43194 453 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 BUD23O43709 281 aaKnown RBP12.6□□□□□ -0.39
VPREB3-201ENST00000248948 KCNJ13O60928 360 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 MTX2O75431 263 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 CDK14O94921 469 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 GAS8O95995 478 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 F3P13726 295 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 VCLP18206 1134 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 ITGALP20701 1170 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 CCKBRP32239 447 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 CXCR5P32302 372 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 BIRC2Q13490 618 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 SNX1Q13596 522 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 LAMB3Q13751 1172 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 KIR2DS5Q14953 304 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 IGF2-ASQ6U949 168 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 TRAPPC5Q8IUR0 188 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 GDAP1Q8TB36 358 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 SLC37A2Q8TED4 501 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 ULK4Q96C45 1275 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 LIN37Q96GY3 246 aaPredicted RBP12.6□□□□□ -0.39
VPREB3-201ENST00000248948 ZNF514Q96K75 400 aaPredicted RBP12.6□□□□□ -0.39
VPREB3-201ENST00000248948 TTC25Q96NG3 672 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 LRRN3Q9H3W5 708 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 SYNDIG1Q9H7V2 258 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 ETNK1Q9HBU6 452 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 ARFGAP3Q9NP61 516 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 RAB6BQ9NRW1 208 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 TBC1D29Q9UFV1 150 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 FKBPLQ9UIM3 349 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 ZMIZ1Q9ULJ6 1067 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 PRKAB1Q9Y478 270 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 PLEKHM1Q9Y4G2 1056 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 PCDHB1Q9Y5F3 818 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 ENTPD2Q9Y5L3 495 aa12.6□□□□□ -0.39
VPREB3-201ENST00000248948 A0A1W2PQM1 296 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 TMX2-CTNND1H3BSU7 103 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 PGRMC1O00264 195 aaKnown RBP12.59□□□□□ -0.39
VPREB3-201ENST00000248948 DXOO77932 396 aaKnown RBP12.59□□□□□ -0.39
VPREB3-201ENST00000248948 ZNF7P17097 686 aaPredicted RBP12.59□□□□□ -0.39
VPREB3-201ENST00000248948 PSMA3P25788 255 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 AKT1P31749 480 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 MLLT3P42568 568 aaPredicted RBP12.59□□□□□ -0.39
VPREB3-201ENST00000248948 LMAN1P49257 510 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 GPLD1P80108 840 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 XIAPP98170 497 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 DMPKQ09013 629 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 TMEM115Q12893 351 aaPredicted RBP12.59□□□□□ -0.39
VPREB3-201ENST00000248948 EIF3IQ13347 325 aaKnown RBP12.59□□□□□ -0.39
VPREB3-201ENST00000248948 PTPRCAPQ14761 206 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 POU6F1Q14863 301 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 MAP9Q49MG5 647 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms