RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 NCEH1Q6PIU2 408 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 RETREG3Q86VR2 466 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 HERC6Q8IVU3 1022 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 GATA6Q92908 595 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 PKP2Q99959 881 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 INSL5Q9Y5Q6 135 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 CHD7Q9P2D1 2997 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 LCHNA4D1U4 455 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 HNRNPRO43390 633 aaKnown RBP15.63■□□□□ 0.09
LRFN1-201ENST00000248668 NRP2O60462 931 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 CXCL10P02778 98 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 ACRP10323 421 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 UGT1A6P19224 532 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 FUT4P22083 530 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 UGT1A1P22309 533 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 UGT1A4P22310 534 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 UGT1A3P35503 534 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 UGT1A5P35504 534 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 CASP2P42575 452 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 LRP8Q14114 963 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 ANKS6Q68DC2 871 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 TTC30BQ8N4P2 665 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 DERL2Q9GZP9 239 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 POLG2Q9UHN1 485 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 PKP3Q9Y446 797 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 PCDHGA4Q9Y5G9 962 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 SLC30A1Q9Y6M5 507 aa15.63■□□□□ 0.09
LRFN1-201ENST00000248668 TEX28O15482 410 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 SNX2O60749 519 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 GUCA1CO95843 209 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 EPHB3P54753 998 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 NFKB2Q00653 900 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 RFTN1Q14699 578 aaPredicted RBP15.62■□□□□ 0.09
LRFN1-201ENST00000248668 LRRC73Q5JTD7 316 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 IL23RQ5VWK5 629 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 SLC39A5Q6ZMH5 540 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 ADGRG6Q86SQ4 1221 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 CD200R1Q8TD46 325 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 OVCA2Q8WZ82 227 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 MYRFLQ96LU7 910 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 ZNF711Q9Y462 761 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 MYOFQ9NZM1 2061 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 TYW5A2RUC4 315 aaKnown RBP15.62■□□□□ 0.09
LRFN1-201ENST00000248668 TRIM38O00635 465 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 HSPA1AP0DMV8 641 aaKnown RBP15.62■□□□□ 0.09
LRFN1-201ENST00000248668 HSPA1BP0DMV9 641 aaKnown RBP15.62■□□□□ 0.09
LRFN1-201ENST00000248668 CCL5P13501 91 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 SYVN1Q86TM6 617 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 RNF168Q8IYW5 571 aaPredicted RBP15.62■□□□□ 0.09
LRFN1-201ENST00000248668 CDYL2Q8N8U2 506 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 RHEBL1Q8TAI7 183 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 PPP2R3CQ969Q6 453 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 HGH1Q9BTY7 390 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 TMEM39AQ9NV64 488 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 MAGEA13PA6NCF6 341 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 TTPAP49638 278 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 IL2P60568 153 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 LCP2Q13094 533 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 PLA2G4EQ3MJ16 856 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 BBS7Q8IWZ6 715 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 SLC39A11Q8N1S5 342 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 ICA1LQ8NDH6 482 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 OR52B6Q8NGF0 335 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 FAM110BQ8TC76 370 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 VPS33AQ96AX1 596 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 VWCEQ96DN2 955 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 TRAPPC9Q96Q05 1148 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 CFAP97Q9P2B7 532 aa15.62■□□□□ 0.09
LRFN1-201ENST00000248668 C1orf232A0A0U1RR37 186 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 ACOT8O14734 319 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 KATNA1O75449 491 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 TSPAN12O95859 305 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 EFEMP2O95967 443 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 VCLP18206 1134 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 STK19P49842 368 aaPredicted RBP15.61■□□□□ 0.09
LRFN1-201ENST00000248668 APLP1P51693 650 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 GALNT1Q10472 559 aaPredicted RBP15.61■□□□□ 0.09
LRFN1-201ENST00000248668 MED21Q13503 144 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 MAPRE2Q15555 327 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 ARMC12Q5T9G4 340 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 FBXL19Q6PCT2 694 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 GPSM1Q86YR5 675 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 NUDT8Q8WV74 236 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 MYLIPQ8WY64 445 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 DCUN1D1Q96GG9 259 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 MYO19Q96H55 970 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 SLC25A23Q9BV35 468 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 ZNF225Q9UK10 706 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 CROTQ9UKG9 612 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 OAS3Q9Y6K5 1087 aaKnown RBP15.61■□□□□ 0.09
LRFN1-201ENST00000248668 RNASEH2AO75792 299 aaKnown RBP15.61■□□□□ 0.09
LRFN1-201ENST00000248668 BCAS2O75934 225 aaPredicted RBP15.61■□□□□ 0.09
LRFN1-201ENST00000248668 TRIM16O95361 564 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 CLDN7O95471 211 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 GNRH1P01148 92 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 CAPN3P20807 821 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 GPX3P22352 226 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 PABPC1LQ4VXU2 614 aaKnown RBP15.61■□□□□ 0.09
LRFN1-201ENST00000248668 SPAG4Q9NPE6 437 aa15.61■□□□□ 0.09
LRFN1-201ENST00000248668 EGFL7Q9UHF1 273 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms