RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 GPSM1Q86YR5 675 aa23.05■■□□□ 1.28
MSX2-201ENST00000239243 ZSWIM3Q96MP5 696 aa23.05■■□□□ 1.28
MSX2-201ENST00000239243 MID1IP1Q9NPA3 183 aa23.05■■□□□ 1.28
MSX2-201ENST00000239243 SLC7A8Q9UHI5 535 aa23.05■■□□□ 1.28
MSX2-201ENST00000239243 SLCO3A1Q9UIG8 710 aa23.05■■□□□ 1.28
MSX2-201ENST00000239243 IKZF3Q9UKT9 509 aa23.05■■□□□ 1.28
MSX2-201ENST00000239243 SLC8A2Q9UPR5 921 aa23.05■■□□□ 1.28
MSX2-201ENST00000239243 HCFC2Q9Y5Z7 792 aa23.05■■□□□ 1.28
MSX2-201ENST00000239243 COPG1Q9Y678 874 aaKnown RBP23.05■■□□□ 1.28
MSX2-201ENST00000239243 MYOFQ9NZM1 2061 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 SNX2O60749 519 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 CDK14O94921 469 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 RPS17P08708 135 aaKnown RBP23.04■■□□□ 1.28
MSX2-201ENST00000239243 CEBPBP17676 345 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 RGS4P49798 205 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 CDH13P55290 713 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 CLCQ05315 142 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 KHDC1Q4VXA5 237 aaKnown RBP23.04■■□□□ 1.28
MSX2-201ENST00000239243 ACSBG2Q5FVE4 666 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 LRRC66Q68CR7 880 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 CELF5Q8N6W0 485 aaKnown RBP23.04■■□□□ 1.28
MSX2-201ENST00000239243 WDR60Q8WVS4 1066 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 ZNF707Q96C28 371 aaPredicted RBP23.04■■□□□ 1.28
MSX2-201ENST00000239243 EBF2Q9HAK2 575 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 PIDD1Q9HB75 910 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 NDE1Q9NXR1 346 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 G3BP2Q9UN86 482 aaKnown RBP23.04■■□□□ 1.28
MSX2-201ENST00000239243 A0A088AWK7 358 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 AGAP14A8MT82 685 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 UGT2B4P06133 528 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 ITGAXP20702 1163 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 SH3BP2P78314 561 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 GEN1Q17RS7 908 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 GDPD4Q6W3E5 623 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 Q6ZVU0 165 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 SPRED2Q7Z698 418 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 ADAMTSL2Q86TH1 951 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 TSPAN33Q86UF1 283 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 SNX32Q86XE0 403 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 C19orf60Q96EN9 201 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 CIPCQ9C0C6 399 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 ERVW-1Q9UQF0 538 aa23.04■■□□□ 1.28
MSX2-201ENST00000239243 AZIN1O14977 448 aa23.03■■□□□ 1.28
MSX2-201ENST00000239243 GPC4O75487 556 aa23.03■■□□□ 1.28
MSX2-201ENST00000239243 TSPAN8P19075 237 aa23.03■■□□□ 1.28
MSX2-201ENST00000239243 CHRNA6Q15825 494 aa23.03■■□□□ 1.28
MSX2-201ENST00000239243 WLSQ5T9L3 541 aa23.03■■□□□ 1.28
MSX2-201ENST00000239243 CLEC6AQ6EIG7 209 aa23.03■■□□□ 1.28
MSX2-201ENST00000239243 C16orf89Q6UX73 402 aa23.03■■□□□ 1.28
MSX2-201ENST00000239243 NXPE1Q8N323 547 aa23.03■■□□□ 1.28
MSX2-201ENST00000239243 ING5Q8WYH8 240 aa23.03■■□□□ 1.28
MSX2-201ENST00000239243 PLEKHG4BQ96PX9 1271 aa23.03■■□□□ 1.28
MSX2-201ENST00000239243 NUDT4Q9NZJ9 180 aa23.03■■□□□ 1.28
MSX2-201ENST00000239243 PER2O15055 1255 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 UBDO15205 165 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 MLYCDO95822 493 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 CHRM1P11229 460 aaPredicted RBP23.02■■□□□ 1.28
MSX2-201ENST00000239243 NFKBIAP25963 317 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 SQLEQ14534 574 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 MAPRE2Q15555 327 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 BRAT1Q6PJG6 821 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 TRPC4APQ8TEL6 797 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 IQCF5A8MTL0 148 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 CCNT2O60583 730 aaKnown RBP23.02■■□□□ 1.28
MSX2-201ENST00000239243 ARHGEF15O94989 841 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 HSPA1AP0DMV8 641 aaKnown RBP23.02■■□□□ 1.28
MSX2-201ENST00000239243 HSPA1BP0DMV9 641 aaKnown RBP23.02■■□□□ 1.28
MSX2-201ENST00000239243 MYOGP15173 224 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 WEE1P30291 646 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 CRY1Q16526 586 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 C1orf146Q5VVC0 180 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 KANK2Q63ZY3 851 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 MACC1Q6ZN28 852 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 DEFB107AQ8IZN7 70 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 OR2A12Q8NGT7 310 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 PBXIP1Q96AQ6 731 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 CLPTM1LQ96KA5 538 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 BRD9Q9H8M2 597 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 CD274Q9NZQ7 290 aa23.02■■□□□ 1.28
MSX2-201ENST00000239243 NKX1-2Q9UD57 310 aaPredicted RBP23.02■■□□□ 1.28
MSX2-201ENST00000239243 A8MX80 341 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 ANP32DO95626 131 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 DGKAP23743 735 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 NSG1P42857 185 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 VASPP50552 380 aaPredicted RBP23.01■■□□□ 1.27
MSX2-201ENST00000239243 ACTR3P61158 418 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 GPM6BQ13491 265 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 UGT3A2Q3SY77 523 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 PREPLQ4J6C6 727 aaPredicted RBP23.01■■□□□ 1.27
MSX2-201ENST00000239243 FRA10AC1Q70Z53 315 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 EFL1Q7Z2Z2 1120 aaKnown RBP23.01■■□□□ 1.27
MSX2-201ENST00000239243 KYQ8NBH2 561 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 GPR26Q8NDV2 337 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 ULK4Q96C45 1275 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 HEPHQ9BQS7 1158 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 BOCQ9BWV1 1114 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 PSMG1O95456 288 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 BMP1P13497 986 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 UGT1A6P19224 532 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 UGT1A1P22309 533 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms