RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 PAPSS1O43252 624 aaPredicted RBP13.13□□□□□ -0.31
NEK9-201ENST00000238616 GPR89BP0CG08 455 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 ATP4AP20648 1035 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 ICAM3P32942 547 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 EIF1AXP47813 144 aaKnown RBP13.13□□□□□ -0.31
NEK9-201ENST00000238616 SCN1BQ07699 218 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 ATP13A5Q4VNC0 1218 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 PLEKHG4Q58EX7 1191 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 ZNF627Q7L945 461 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 KLHL5Q96PQ7 755 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 KIAA1683Q9H0B3 1180 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 NUP50Q9UKX7 468 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 AP3M1Q9Y2T2 418 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 PCDHGB5Q9Y5G0 923 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 ACTL7BQ9Y614 415 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 FAM237BA0A1B0GVD1 139 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 TLX3O43711 291 aaPredicted RBP13.13□□□□□ -0.31
NEK9-201ENST00000238616 PECAM1P16284 738 aaPredicted RBP13.13□□□□□ -0.31
NEK9-201ENST00000238616 MLLT3P42568 568 aaPredicted RBP13.13□□□□□ -0.31
NEK9-201ENST00000238616 AVPR1BP47901 424 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 RGS8P57771 180 aaPredicted RBP13.13□□□□□ -0.31
NEK9-201ENST00000238616 MXD1Q05195 221 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 C5orf22Q49AR2 442 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 FBXO48Q5FWF7 155 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 GPR180Q86V85 440 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 DPYSL5Q9BPU6 564 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 ZSCAN5CA6NGD5 496 aaPredicted RBP13.13□□□□□ -0.31
NEK9-201ENST00000238616 ZSCAN5BA6NJL1 495 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 AXIN1O15169 862 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 SMAD9O15198 467 aaKnown RBP13.13□□□□□ -0.31
NEK9-201ENST00000238616 ADSSP30520 456 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 RAB39AQ14964 217 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 BORCS8Q96FH0 119 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 ANXA2P2A6NMY6 339 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 MSI1O43347 362 aaKnown RBP13.13□□□□□ -0.31
NEK9-201ENST00000238616 ANXA2P07355 339 aaKnown RBP13.13□□□□□ -0.31
NEK9-201ENST00000238616 PSEN1P49768 467 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 RNF43Q68DV7 783 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 LINGO4Q6UY18 593 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 CHST15Q7LFX5 561 aaPredicted RBP13.13□□□□□ -0.31
NEK9-201ENST00000238616 ADAMTSL2Q86TH1 951 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 GIPC3Q8TF64 312 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 HPS1Q92902 700 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 TCF25Q9BQ70 676 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 CPED1A4D0V7 1026 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 AP5Z1O43299 807 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 LDOC1O95751 146 aaPredicted RBP13.13□□□□□ -0.31
NEK9-201ENST00000238616 TRUB2O95900 331 aaKnown RBP13.13□□□□□ -0.31
NEK9-201ENST00000238616 CMPK1P30085 196 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 SLC25A3Q00325 362 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 IQCHQ86VS3 1027 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 C10orf107Q8IVU9 208 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 CPT1CQ8TCG5 803 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 PTCD3Q96EY7 689 aaKnown RBP13.13□□□□□ -0.31
NEK9-201ENST00000238616 A0A0A0MRY4 1105 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 E2F3O00716 465 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 MAFKO60675 156 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 NR2F6P10588 404 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 YAP1P46937 504 aaKnown RBP13.13□□□□□ -0.31
NEK9-201ENST00000238616 NR0B1P51843 470 aaKnown RBP13.13□□□□□ -0.31
NEK9-201ENST00000238616 LIPMQ5VYY2 423 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 PAPD7Q5XG87 772 aaKnown RBP13.13□□□□□ -0.31
NEK9-201ENST00000238616 THAP5Q7Z6K1 395 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 COPS5Q92905 334 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 SPATA13Q96N96 652 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 TRPV5Q9NQA5 729 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 RBMX2Q9Y388 322 aaKnown RBP13.13□□□□□ -0.31
NEK9-201ENST00000238616 LOC100509620A0A075B734 347 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 SRCP12931 536 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 IL7RP16871 459 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 EPHA3P29320 983 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 HYAL2Q12891 473 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 MTX3Q5HYI7 312 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 ATAT1Q5SQI0 421 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 TTC27Q6P3X3 843 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 ZSCAN1Q8NBB4 408 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 ZNF548Q8NEK5 533 aaPredicted RBP13.13□□□□□ -0.31
NEK9-201ENST00000238616 HERVK_113Q902F9 699 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 CLP1Q92989 425 aaKnown RBP13.13□□□□□ -0.31
NEK9-201ENST00000238616 SLC25A36Q96CQ1 311 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 CLPTM1LQ96KA5 538 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 UROC1Q96N76 676 aa13.13□□□□□ -0.31
NEK9-201ENST00000238616 NEXMIFQ5QGS0 1516 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 FUT4P22083 530 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 UQCRC1P31930 480 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 MAPK12P53778 367 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 ELOA2Q8IYF1 753 aaPredicted RBP13.12□□□□□ -0.31
NEK9-201ENST00000238616 ZNF567Q8N184 647 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 HMGB4Q8WW32 186 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 PURBQ96QR8 312 aaKnown RBP13.12□□□□□ -0.31
NEK9-201ENST00000238616 TOR3AQ9H497 397 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 ENY2Q9NPA8 101 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 PHPT1Q9NRX4 125 aaPredicted RBP13.12□□□□□ -0.31
NEK9-201ENST00000238616 PLAGL2Q9UPG8 496 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 ZNF510Q9Y2H8 683 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 A0A1W2PQH9 124 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 ZNF726A6NNF4 738 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 UGT2B4P06133 528 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 GJB1P08034 283 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 RPL19P84098 196 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms