RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 TTC1Q99614 292 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 LGR4Q9BXB1 951 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 GSDMCQ9BYG8 508 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 FRMD8Q9BZ67 464 aaPredicted RBP11.18□□□□□ -0.62
SF3B6-201ENST00000233468 IL22Q9GZX6 179 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 TRIM39Q9HCM9 518 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 FGF22Q9HCT0 170 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 IL26Q9NPH9 171 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 TRNAU1APQ9NX07 287 aaKnown RBP11.18□□□□□ -0.62
SF3B6-201ENST00000233468 PCYOX1Q9UHG3 505 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 APOBEC2Q9Y235 224 aaKnown RBP11.18□□□□□ -0.62
SF3B6-201ENST00000233468 SLC30A1Q9Y6M5 507 aa11.18□□□□□ -0.62
SF3B6-201ENST00000233468 KNTC1P50748 2209 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 FFAR2O15552 330 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 VEGFDO43915 354 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 PRAMEF1O95521 474 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 SOD1P00441 154 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 RALBP11234 206 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 TPH1P17752 444 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 PPARGP37231 505 aaPredicted RBP11.17□□□□□ -0.62
SF3B6-201ENST00000233468 ADCY8P40145 1251 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 GNPDA1P46926 289 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 VPS41P49754 854 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 DR1Q01658 176 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 CKAP4Q07065 602 aaKnown RBP11.17□□□□□ -0.62
SF3B6-201ENST00000233468 ILKQ13418 452 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 TUBB2AQ13885 445 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 DHX34Q14147 1143 aaKnown RBP11.17□□□□□ -0.62
SF3B6-201ENST00000233468 POU6F1Q14863 301 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 TRIP13Q15645 432 aaPredicted RBP11.17□□□□□ -0.62
SF3B6-201ENST00000233468 COL28A1Q2UY09 1125 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 GPR33Q49SQ1 333 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 TTC27Q6P3X3 843 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 LRRC8BQ6P9F7 803 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 FAM151BQ6UXP7 276 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 TAF8Q7Z7C8 310 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 C17orf53Q8N3J3 647 aaPredicted RBP11.17□□□□□ -0.62
SF3B6-201ENST00000233468 FAM181AQ8N9Y4 354 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 GLIS1Q8NBF1 620 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 ZNF398Q8TD17 642 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 HNRNPLLQ8WVV9 542 aaKnown RBP11.17□□□□□ -0.62
SF3B6-201ENST00000233468 OR1E3Q8WZA6 343 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.17□□□□□ -0.62
SF3B6-201ENST00000233468 PDXPQ96GD0 296 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 SCARF2Q96GP6 870 aaPredicted RBP11.17□□□□□ -0.62
SF3B6-201ENST00000233468 CNDP2Q96KP4 475 aaKnown RBP11.17□□□□□ -0.62
SF3B6-201ENST00000233468 LRRC61Q9BV99 259 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 TUBB2BQ9BVA1 445 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 DDX47Q9H0S4 455 aaKnown RBP11.17□□□□□ -0.62
SF3B6-201ENST00000233468 XAB2Q9HCS7 855 aaKnown RBP11.17□□□□□ -0.62
SF3B6-201ENST00000233468 CASS4Q9NQ75 786 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 SMOXQ9NWM0 555 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 SMARCAL1Q9NZC9 954 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 ASIC3Q9UHC3 531 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 KLF15Q9UIH9 416 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 RIMKLBQ9ULI2 386 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 SUFUQ9UMX1 484 aa11.17□□□□□ -0.62
SF3B6-201ENST00000233468 SMG1Q96Q15 3661 aaKnown RBP11.16□□□□□ -0.62
SF3B6-201ENST00000233468 MAGEB16A2A368 324 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 FAM149AA5PLN7 773 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 FADS2P1A8MWK0 482 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 CFAP99D6REC4 459 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 F8W8V4 182 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 ZW10O43264 779 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 LDB2O43679 373 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 BUD23O43709 281 aaKnown RBP11.16□□□□□ -0.62
SF3B6-201ENST00000233468 KCNJ13O60928 360 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 SRP72O76094 671 aaKnown RBP11.16□□□□□ -0.62
SF3B6-201ENST00000233468 MLNP12872 115 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 CKMT2P17540 419 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 VCLP18206 1134 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 MSH3P20585 1137 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 MAGEA6P43360 314 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 ZNF140P52738 457 aaPredicted RBP11.16□□□□□ -0.62
SF3B6-201ENST00000233468 DAB2P98082 770 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 MSLNQ13421 630 aaPredicted RBP11.16□□□□□ -0.62
SF3B6-201ENST00000233468 OLIG2Q13516 323 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 CHRNA6Q15825 494 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 ATP13A5Q4VNC0 1218 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 PCID2Q5JVF3 399 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 KDM7AQ6ZMT4 941 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 KANSL1Q7Z3B3 1105 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 MAATS1Q7Z4T9 603 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 SNX20Q7Z614 316 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 PRUNE1Q86TP1 453 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 KLHL7Q8IXQ5 586 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 RBFAQ8N0V3 343 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 PELI3Q8N2H9 469 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 MCUQ8NE86 351 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 OR6C4Q8NGE1 309 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 DCUN1D1Q96GG9 259 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 ZNF514Q96K75 400 aaPredicted RBP11.16□□□□□ -0.62
SF3B6-201ENST00000233468 C16orf45Q96MC5 204 aaPredicted RBP11.16□□□□□ -0.62
SF3B6-201ENST00000233468 OR2M4Q96R27 311 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 CCDC86Q9H6F5 360 aaKnown RBP11.16□□□□□ -0.62
SF3B6-201ENST00000233468 ASB8Q9H765 288 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 NLE1Q9NVX2 485 aaPredicted RBP11.16□□□□□ -0.62
SF3B6-201ENST00000233468 UCKL1Q9NWZ5 548 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 ZNHIT2Q9UHR6 403 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 CRLS1Q9UJA2 301 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms