RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 C1orf216Q8TAB5 229 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 FAM174AQ8TBP5 190 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 EPS8L3Q8TE67 593 aaKnown RBP13.9□□□□□ -0.18
SEC61B-201ENST00000223641 HEXDCQ8WVB3 486 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 FUBP1Q96AE4 644 aaKnown RBP13.9□□□□□ -0.18
SEC61B-201ENST00000223641 CCDC97Q96F63 343 aaPredicted RBP13.9□□□□□ -0.18
SEC61B-201ENST00000223641 BIRC8Q96P09 236 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 COPS8Q99627 209 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 APOOQ9BUR5 198 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 BOCQ9BWV1 1114 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 LGR4Q9BXB1 951 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 TRIM39Q9HCM9 518 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 GPR27Q9NS67 375 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 PSMC3IPQ9P2W1 217 aaPredicted RBP13.9□□□□□ -0.18
SEC61B-201ENST00000223641 LGALS13Q9UHV8 139 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 OAS3Q9Y6K5 1087 aaKnown RBP13.9□□□□□ -0.18
SEC61B-201ENST00000223641 THADAQ6YHU6 1953 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 FANCMQ8IYD8 2048 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 PIKFYVEQ9Y2I7 2098 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 PRMT5O14744 637 aaPredicted RBP13.89□□□□□ -0.19
SEC61B-201ENST00000223641 HRO43593 1189 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 GALR2O43603 387 aaPredicted RBP13.89□□□□□ -0.19
SEC61B-201ENST00000223641 SGTAO43765 313 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 OR1I1O60431 355 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 LILRB5O75023 590 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 F7P08709 466 aaPredicted RBP13.89□□□□□ -0.19
SEC61B-201ENST00000223641 CD9P21926 228 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 TMEM115Q12893 351 aaPredicted RBP13.89□□□□□ -0.19
SEC61B-201ENST00000223641 TNFAIP8L3Q5GJ75 292 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 PMS2CLQ68D20 193 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 ZNF549Q6P9A3 640 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 KYAT3Q6YP21 454 aaKnown RBP13.89□□□□□ -0.19
SEC61B-201ENST00000223641 OTUD6BQ8N6M0 293 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 MZB1Q8WU39 189 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 VPS39Q96JC1 886 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 ZC3H10Q96K80 434 aaKnown RBP13.89□□□□□ -0.19
SEC61B-201ENST00000223641 PKNOX2Q96KN3 472 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 GPR22Q99680 433 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 WDR26Q9H7D7 661 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 ZSCAN32Q9NX65 697 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 TXNDC16Q9P2K2 825 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 CRYL1Q9Y2S2 319 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 PCDHB1Q9Y5F3 818 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 COMMD10Q9Y6G5 202 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 IKBKGQ9Y6K9 419 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 USP34Q70CQ2 3546 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 ZNF318Q5VUA4 2279 aa13.89□□□□□ -0.19
SEC61B-201ENST00000223641 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 H0Y8X5 98 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 INPP4BO15327 924 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 MAP3K13O43283 966 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 VEGFDO43915 354 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 SLC34A2O95436 690 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 ESR1P03372 595 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 ITGA2BP08514 1039 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 MYCLP1P12525 358 aaPredicted RBP13.88□□□□□ -0.19
SEC61B-201ENST00000223641 ATP1B2P14415 290 aaPredicted RBP13.88□□□□□ -0.19
SEC61B-201ENST00000223641 POLD2P49005 469 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 CSRP3P50461 194 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 CLDN2P57739 230 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 KIAA1024LP59773 190 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 CTSL3PQ5NE16 218 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 CEP85LQ5SZL2 805 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 LGSNQ5TDP6 509 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 KDM7AQ6ZMT4 941 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 MACC1Q6ZN28 852 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 LPCAT2Q7L5N7 544 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 ADGRG6Q86SQ4 1221 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 TMEFF1Q8IYR6 380 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 CYP4X1Q8N118 509 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 ISL2Q96A47 359 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 MRRFQ96E11 262 aaKnown RBP13.88□□□□□ -0.19
SEC61B-201ENST00000223641 SERAC1Q96JX3 654 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 HSPA12BQ96MM6 686 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 SH3GL2Q99962 352 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 AARSD1Q9BTE6 412 aaKnown RBP13.88□□□□□ -0.19
SEC61B-201ENST00000223641 PHPT1Q9NRX4 125 aaPredicted RBP13.88□□□□□ -0.19
SEC61B-201ENST00000223641 CTNNAL1Q9UBT7 734 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 MED16Q9Y2X0 877 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 MTO1Q9Y2Z2 717 aaKnown RBP13.88□□□□□ -0.19
SEC61B-201ENST00000223641 OR1A2Q9Y585 309 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 SLCO1B1Q9Y6L6 691 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 PRSS21Q9Y6M0 314 aa13.88□□□□□ -0.19
SEC61B-201ENST00000223641 IQANK1A0A1B0GTG1 560 aa13.87□□□□□ -0.19
SEC61B-201ENST00000223641 A0A1W2PR77 199 aa13.87□□□□□ -0.19
SEC61B-201ENST00000223641 UBA6A0AVT1 1052 aaPredicted RBP13.87□□□□□ -0.19
SEC61B-201ENST00000223641 GPR89AB7ZAQ6 455 aa13.87□□□□□ -0.19
SEC61B-201ENST00000223641 CFAP99D6REC4 459 aa13.87□□□□□ -0.19
SEC61B-201ENST00000223641 CHUKO15111 745 aa13.87□□□□□ -0.19
SEC61B-201ENST00000223641 MTX2O75431 263 aa13.87□□□□□ -0.19
SEC61B-201ENST00000223641 KRT37O76014 449 aa13.87□□□□□ -0.19
SEC61B-201ENST00000223641 KRT38O76015 456 aa13.87□□□□□ -0.19
SEC61B-201ENST00000223641 AP2A2O94973 939 aa13.87□□□□□ -0.19
SEC61B-201ENST00000223641 SNRPAP09012 282 aaKnown RBP13.87□□□□□ -0.19
SEC61B-201ENST00000223641 GPR89BP0CG08 455 aa13.87□□□□□ -0.19
SEC61B-201ENST00000223641 RALBP11234 206 aa13.87□□□□□ -0.19
SEC61B-201ENST00000223641 PKMP14618 531 aaKnown RBP13.87□□□□□ -0.19
SEC61B-201ENST00000223641 ABCG1P45844 678 aa13.87□□□□□ -0.19
SEC61B-201ENST00000223641 SLCO1A2P46721 670 aa13.87□□□□□ -0.19
SEC61B-201ENST00000223641 RABIFP47224 123 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms