RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 BMP1P13497 986 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 IGFBP6P24592 240 aaPredicted RBP13.54□□□□□ -0.24
GABPB1-201ENST00000220429 SV2CQ496J9 727 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 CST9Q5W186 159 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 EID3Q8N140 333 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 OR7A2PQ8NGA2 310 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 KCTD4Q8WVF5 259 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 NDRG1Q92597 394 aaKnown RBP13.54□□□□□ -0.24
GABPB1-201ENST00000220429 HSFY1Q96LI6 401 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 RIPOR3Q96MK2 946 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 TSNARE1Q96NA8 513 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 COG4Q9H9E3 785 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 EFCAB1Q9HAE3 211 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 RIMKLBQ9ULI2 386 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 TCRBV3S1A0A5B6 114 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 SAGE2PA6NJ88 616 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 A8MV72 311 aaPredicted RBP13.54□□□□□ -0.24
GABPB1-201ENST00000220429 PTGESO14684 152 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 HUS1O60921 280 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 GSRP00390 522 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 SERPINE1P05121 402 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 PSKH1P11801 424 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 HOXC8P31273 242 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 CAPGP40121 348 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 CENPAP49450 140 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 YWHAZP63104 245 aaKnown RBP13.54□□□□□ -0.24
GABPB1-201ENST00000220429 BMPR2Q13873 1038 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 RFTN1Q14699 578 aaPredicted RBP13.54□□□□□ -0.24
GABPB1-201ENST00000220429 PLCL1Q15111 1095 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 SYCE2Q6PIF2 218 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 EPGNQ6UW88 154 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 SPATC1Q76KD6 591 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 B3GALNT2Q8NCR0 500 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 PBXIP1Q96AQ6 731 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 RNF170Q96K19 258 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 ZFP42Q96MM3 310 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 UROC1Q96N76 676 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 KCTD14Q9BQ13 255 aaPredicted RBP13.54□□□□□ -0.24
GABPB1-201ENST00000220429 AP5M1Q9H0R1 490 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 PMF1-BGLAPU3KQ54 211 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 TRPC5OSA6NMA1 111 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 XYLBO75191 536 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 PRKD3O94806 890 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 OR5F1O95221 314 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 PDGFAP04085 211 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 GLDCP23378 1020 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 NUMBP49757 651 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 CBLBQ13191 982 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 LAPTM5Q13571 262 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 SQLEQ14534 574 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 TAF1CQ15572 869 aaPredicted RBP13.53□□□□□ -0.24
GABPB1-201ENST00000220429 SLC9B1Q4ZJI4 515 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 PIGZQ86VD9 579 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 DHRSXQ8N5I4 330 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 PHF10Q8WUB8 498 aaKnown RBP13.53□□□□□ -0.24
GABPB1-201ENST00000220429 CNDP1Q96KN2 507 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 CSPG4P5Q96PW8 444 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 NTN4Q9HB63 628 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 SFMBT1Q9UHJ3 866 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 GTF2IRD1Q9UHL9 959 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 GMEB2Q9UKD1 530 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 DIMT1Q9UNQ2 313 aaKnown RBP13.53□□□□□ -0.24
GABPB1-201ENST00000220429 BRCA2P51587 3418 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 CLDN5O00501 218 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 SERPINI2O75830 405 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 TOP3BO95985 862 aaKnown RBP13.53□□□□□ -0.24
GABPB1-201ENST00000220429 WARSP23381 471 aaKnown RBP13.53□□□□□ -0.24
GABPB1-201ENST00000220429 IL12AP29459 219 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 MAGEA6P43360 314 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 BLVRAP53004 296 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 HUNKP57058 714 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 TOP3AQ13472 1001 aaPredicted RBP13.53□□□□□ -0.24
GABPB1-201ENST00000220429 KRR1Q13601 381 aaKnown RBP13.53□□□□□ -0.24
GABPB1-201ENST00000220429 ERMP1Q7Z2K6 904 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 EPHX4Q8IUS5 362 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 UBQLNLQ8IYU4 475 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 PYROXD2Q8N2H3 581 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 TOP6BLQ8N6T0 577 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 SLC22A8Q8TCC7 542 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 PROX1Q92786 737 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 TNIP3Q96KP6 325 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 MIR1-1HGQ9H1L0 117 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 DSN1Q9H410 356 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 CACNG4Q9UBN1 327 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 MFHAS1Q9Y4C4 1052 aa13.53□□□□□ -0.24
GABPB1-201ENST00000220429 TSC2P49815 1807 aa13.52□□□□□ -0.24
GABPB1-201ENST00000220429 MEIS3P2A8K0S8 358 aa13.52□□□□□ -0.24
GABPB1-201ENST00000220429 NRP1O14786 923 aa13.52□□□□□ -0.24
GABPB1-201ENST00000220429 BEST1O76090 585 aa13.52□□□□□ -0.24
GABPB1-201ENST00000220429 GOT2P00505 430 aaKnown RBP13.52□□□□□ -0.24
GABPB1-201ENST00000220429 C1QAP02745 245 aa13.52□□□□□ -0.24
GABPB1-201ENST00000220429 APRTP07741 180 aa13.52□□□□□ -0.24
GABPB1-201ENST00000220429 DNAJB2P25686 324 aa13.52□□□□□ -0.24
GABPB1-201ENST00000220429 LRPAP1P30533 357 aa13.52□□□□□ -0.24
GABPB1-201ENST00000220429 PURAQ00577 322 aaKnown RBP13.52□□□□□ -0.24
GABPB1-201ENST00000220429 ADIGQ0VDE8 80 aa13.52□□□□□ -0.24
GABPB1-201ENST00000220429 FSCN1Q16658 493 aaKnown RBP13.52□□□□□ -0.24
GABPB1-201ENST00000220429 TMEM236Q5W0B7 351 aa13.52□□□□□ -0.24
GABPB1-201ENST00000220429 PAQR9Q6ZVX9 377 aa13.52□□□□□ -0.24
GABPB1-201ENST00000220429 NOXA1Q86UR1 476 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms