RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 TRAF6Q9Y4K3 522 aa11.01□□□□□ -0.65
USP31-201ENST00000219689 F8VP50 259 aa11.01□□□□□ -0.65
USP31-201ENST00000219689 hCG_2039718K7EN88 272 aa11.01□□□□□ -0.65
USP31-201ENST00000219689 MSH4O15457 936 aa11.01□□□□□ -0.65
USP31-201ENST00000219689 ICAM3P32942 547 aa11.01□□□□□ -0.65
USP31-201ENST00000219689 C10orf120Q5SQS8 335 aa11.01□□□□□ -0.65
USP31-201ENST00000219689 ZNF781Q8N8C0 355 aa11.01□□□□□ -0.65
USP31-201ENST00000219689 OR2T12Q8NG77 320 aa11.01□□□□□ -0.65
USP31-201ENST00000219689 ANKRD26Q9UPS8 1709 aa11.01□□□□□ -0.65
USP31-201ENST00000219689 KCNH4Q9UQ05 1017 aa11.01□□□□□ -0.65
USP31-201ENST00000219689 CSN2P05814 226 aa11□□□□□ -0.65
USP31-201ENST00000219689 ARFIP1P53367 373 aa11□□□□□ -0.65
USP31-201ENST00000219689 TMEM62Q0P6H9 643 aa11□□□□□ -0.65
USP31-201ENST00000219689 LEMD2Q8NC56 503 aa11□□□□□ -0.65
USP31-201ENST00000219689 TIGARQ9NQ88 270 aa11□□□□□ -0.65
USP31-201ENST00000219689 IFT46Q9NQC8 304 aa11□□□□□ -0.65
USP31-201ENST00000219689 PCDHGA11Q9Y5H2 935 aa11□□□□□ -0.65
USP31-201ENST00000219689 TLL2Q9Y6L7 1015 aa11□□□□□ -0.65
USP31-201ENST00000219689 NUPL2O15504 423 aaKnown RBP11□□□□□ -0.65
USP31-201ENST00000219689 TXNL1O43396 289 aa11□□□□□ -0.65
USP31-201ENST00000219689 PRKG2Q13237 762 aa11□□□□□ -0.65
USP31-201ENST00000219689 TBC1D25Q3MII6 688 aa11□□□□□ -0.65
USP31-201ENST00000219689 PPM1JQ5JR12 505 aa11□□□□□ -0.65
USP31-201ENST00000219689 LAPTM4BQ86VI4 370 aa11□□□□□ -0.65
USP31-201ENST00000219689 RIOX2Q8IUF8 465 aa11□□□□□ -0.65
USP31-201ENST00000219689 ZNF548Q8NEK5 533 aaPredicted RBP11□□□□□ -0.65
USP31-201ENST00000219689 PMM1Q92871 262 aa11□□□□□ -0.65
USP31-201ENST00000219689 MGME1Q9BQP7 344 aa11□□□□□ -0.65
USP31-201ENST00000219689 ADGRE3Q9BY15 652 aa11□□□□□ -0.65
USP31-201ENST00000219689 CCDC86Q9H6F5 360 aaKnown RBP11□□□□□ -0.65
USP31-201ENST00000219689 CYTH4Q9UIA0 394 aa11□□□□□ -0.65
USP31-201ENST00000219689 ANKRD31Q8N7Z5 1873 aa11□□□□□ -0.65
USP31-201ENST00000219689 RNF225M0QZC1 329 aaPredicted RBP11□□□□□ -0.65
USP31-201ENST00000219689 NDUFB10O96000 172 aa11□□□□□ -0.65
USP31-201ENST00000219689 BUD31P41223 144 aaPredicted RBP11□□□□□ -0.65
USP31-201ENST00000219689 HARS2P49590 506 aaKnown RBP11□□□□□ -0.65
USP31-201ENST00000219689 PCID2Q5JVF3 399 aa11□□□□□ -0.65
USP31-201ENST00000219689 PLEKHG7Q6ZR37 379 aa11□□□□□ -0.65
USP31-201ENST00000219689 CUZD1Q86UP6 607 aa11□□□□□ -0.65
USP31-201ENST00000219689 PHACTR4Q8IZ21 702 aa11□□□□□ -0.65
USP31-201ENST00000219689 KAT2AQ92830 837 aa11□□□□□ -0.65
USP31-201ENST00000219689 TVP23AA6NH52 213 aa11□□□□□ -0.65
USP31-201ENST00000219689 ERP29P30040 261 aaKnown RBP11□□□□□ -0.65
USP31-201ENST00000219689 SMIM30A4D0T7 59 aa11□□□□□ -0.65
USP31-201ENST00000219689 IL7RP16871 459 aa11□□□□□ -0.65
USP31-201ENST00000219689 SLC12A3P55017 1021 aa11□□□□□ -0.65
USP31-201ENST00000219689 GLT6D1Q7Z4J2 308 aa11□□□□□ -0.65
USP31-201ENST00000219689 CPSF7Q8N684 471 aaKnown RBP11□□□□□ -0.65
USP31-201ENST00000219689 ZNF420Q8TAQ5 688 aaPredicted RBP11□□□□□ -0.65
USP31-201ENST00000219689 C17orf75Q9HAS0 396 aa11□□□□□ -0.65
USP31-201ENST00000219689 TMEM5Q9Y2B1 443 aa11□□□□□ -0.65
USP31-201ENST00000219689 RNF17Q9BXT8 1623 aaKnown RBP11□□□□□ -0.65
USP31-201ENST00000219689 RAB3BP20337 219 aa11□□□□□ -0.65
USP31-201ENST00000219689 MUTP22033 750 aa11□□□□□ -0.65
USP31-201ENST00000219689 SMIM11AP58511 58 aa11□□□□□ -0.65
USP31-201ENST00000219689 TGM3Q08188 693 aa11□□□□□ -0.65
USP31-201ENST00000219689 STK11Q15831 433 aa11□□□□□ -0.65
USP31-201ENST00000219689 PPP1R26Q5T8A7 1209 aaPredicted RBP11□□□□□ -0.65
USP31-201ENST00000219689 C16orf86Q6ZW13 317 aa11□□□□□ -0.65
USP31-201ENST00000219689 PAQR7Q86WK9 346 aa11□□□□□ -0.65
USP31-201ENST00000219689 SLC22A8Q8TCC7 542 aa11□□□□□ -0.65
USP31-201ENST00000219689 ALG3Q92685 438 aa11□□□□□ -0.65
USP31-201ENST00000219689 SPATA9Q9BWV2 254 aa11□□□□□ -0.65
USP31-201ENST00000219689 ZNF304Q9HCX3 659 aa11□□□□□ -0.65
USP31-201ENST00000219689 PIN4Q9Y237 131 aaKnown RBP11□□□□□ -0.65
USP31-201ENST00000219689 F5H6K3 240 aa11□□□□□ -0.65
USP31-201ENST00000219689 DPYSL4O14531 572 aa11□□□□□ -0.65
USP31-201ENST00000219689 SPARCP09486 303 aa11□□□□□ -0.65
USP31-201ENST00000219689 ELK4P28324 431 aa11□□□□□ -0.65
USP31-201ENST00000219689 RNF151Q2KHN1 245 aa11□□□□□ -0.65
USP31-201ENST00000219689 C7orf26Q96N11 449 aa11□□□□□ -0.65
USP31-201ENST00000219689 NANSQ9NR45 359 aa11□□□□□ -0.65
USP31-201ENST00000219689 SAMD4AQ9UPU9 718 aaKnown RBP11□□□□□ -0.65
USP31-201ENST00000219689 CFL2Q9Y281 166 aa11□□□□□ -0.65
USP31-201ENST00000219689 APOC4-APOC2K7ER74 178 aa11□□□□□ -0.65
USP31-201ENST00000219689 SLITRK5O94991 958 aa11□□□□□ -0.65
USP31-201ENST00000219689 OR6A2O95222 327 aa11□□□□□ -0.65
USP31-201ENST00000219689 MLYCDO95822 493 aa11□□□□□ -0.65
USP31-201ENST00000219689 APOC2P02655 101 aa11□□□□□ -0.65
USP31-201ENST00000219689 CDKN2CP42773 168 aa11□□□□□ -0.65
USP31-201ENST00000219689 RASGEF1CQ8N431 466 aa11□□□□□ -0.65
USP31-201ENST00000219689 ZNF518BQ9C0D4 1074 aa11□□□□□ -0.65
USP31-201ENST00000219689 PCDHB16Q9NRJ7 776 aa11□□□□□ -0.65
USP31-201ENST00000219689 RBM22Q9NW64 420 aaKnown RBP eCLIP11□□□□□ -0.65
USP31-201ENST00000219689 ZNF639Q9UID6 485 aa11□□□□□ -0.65
USP31-201ENST00000219689 SHPRHQ149N8 1683 aa10.99□□□□□ -0.65
USP31-201ENST00000219689 ANKRD63C9JTQ0 380 aa10.99□□□□□ -0.65
USP31-201ENST00000219689 SGCEO43556 437 aa10.99□□□□□ -0.65
USP31-201ENST00000219689 PCSK1P29120 753 aa10.99□□□□□ -0.65
USP31-201ENST00000219689 CBLBQ13191 982 aa10.99□□□□□ -0.65
USP31-201ENST00000219689 ADGRD2Q7Z7M1 963 aa10.99□□□□□ -0.65
USP31-201ENST00000219689 ZNF410Q86VK4 478 aa10.99□□□□□ -0.65
USP31-201ENST00000219689 RDH11Q8TC12 318 aa10.99□□□□□ -0.65
USP31-201ENST00000219689 EBNA1BP2Q99848 306 aaKnown RBP10.99□□□□□ -0.65
USP31-201ENST00000219689 UNC93B1Q9H1C4 597 aa10.99□□□□□ -0.65
USP31-201ENST00000219689 NUDT15Q9NV35 164 aa10.99□□□□□ -0.65
USP31-201ENST00000219689 ERVK-25P63136 954 aa10.99□□□□□ -0.65
USP31-201ENST00000219689 ZNF773Q6PK81 442 aa10.99□□□□□ -0.65
USP31-201ENST00000219689 APTXQ7Z2E3 356 aaKnown RBP10.99□□□□□ -0.65
USP31-201ENST00000219689 TMEM203Q969S6 136 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms