RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 PRR35P0CG20 571 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 RPS9P46781 194 aaKnown RBP17.14■□□□□ 0.33
USB1-201ENST00000219281 SPATS1Q496A3 300 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 CYBRD1Q53TN4 286 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 OGFOD2Q6N063 350 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 LYSMD3Q7Z3D4 306 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 PTRH1Q86Y79 214 aaKnown RBP17.14■□□□□ 0.33
USB1-201ENST00000219281 CPNE9Q8IYJ1 553 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 KIAA2013Q8IYS2 634 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 PCSK9Q8NBP7 692 aaKnown RBP17.14■□□□□ 0.33
USB1-201ENST00000219281 ZNF599Q96NL3 588 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 DERL2Q9GZP9 239 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 MUC13Q9H3R2 512 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 MED16Q9Y2X0 877 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 PATJQ8NI35 1801 aa17.14■□□□□ 0.33
USB1-201ENST00000219281 NPEPPSL1A6NEC2 478 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 ZNF701M0R085 212 aaPredicted RBP17.13■□□□□ 0.33
USB1-201ENST00000219281 GIPC1O14908 333 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 EEDO75530 441 aaKnown RBP17.13■□□□□ 0.33
USB1-201ENST00000219281 SLC22A3O75751 556 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 C7P10643 843 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 OR1E1P30953 314 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 SCNN1BP51168 640 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 SP3Q02447 781 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 RAD51Q06609 339 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 ILF2Q12905 390 aaKnown RBP17.13■□□□□ 0.33
USB1-201ENST00000219281 TYSND1Q2T9J0 566 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 GPR107Q5VW38 600 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 PATL1Q86TB9 770 aaKnown RBP17.13■□□□□ 0.33
USB1-201ENST00000219281 BBS5Q8N3I7 341 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 FNDC8Q8TC99 324 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 TSPEARQ8WU66 669 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 PEX13Q92968 403 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 MYEOVQ96EZ4 313 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 VPS50Q96JG6 964 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 HHIPL1Q96JK4 782 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 BTN2A3PQ96KV6 586 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 ACOX2Q99424 681 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 SLC30A3Q99726 388 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 SEZ6LQ9BYH1 1024 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 TAS2R13Q9NYV9 303 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 GALPQ9UBC7 116 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 ZNF225Q9UK10 706 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 NOD1Q9Y239 953 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 ACTL7AQ9Y615 435 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 SNAP29O95721 258 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 C1RP00736 705 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 RPS17P08708 135 aaKnown RBP17.13■□□□□ 0.33
USB1-201ENST00000219281 POLR2JP52435 117 aaKnown RBP17.13■□□□□ 0.33
USB1-201ENST00000219281 ACLYP53396 1101 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 MBTPS1Q14703 1052 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 RAB39AQ14964 217 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 C16orf72Q14CZ0 275 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 PLCL1Q15111 1095 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 RBBP7Q16576 425 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 TIGD2Q4W5G0 525 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 NANOGP8Q6NSW7 305 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 UGT3A1Q6NUS8 523 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 TRAF7Q6Q0C0 670 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 CROCCP3Q8IVE0 287 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 TBC1D21Q8IYX1 336 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 TMEM199Q8N511 208 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 FUBP1Q96AE4 644 aaKnown RBP17.13■□□□□ 0.33
USB1-201ENST00000219281 ESAMQ96AP7 390 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 BIRC7Q96CA5 298 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 UROC1Q96N76 676 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 CCDC68Q9H2F9 335 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 NANOGQ9H9S0 305 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 POLR1BQ9H9Y6 1135 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 C8orf4Q9NR00 106 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 INTS7Q9NVH2 962 aaKnown RBP17.13■□□□□ 0.33
USB1-201ENST00000219281 INTS10Q9NVR2 710 aaKnown RBP17.13■□□□□ 0.33
USB1-201ENST00000219281 LEF1Q9UJU2 399 aaPredicted RBP17.13■□□□□ 0.33
USB1-201ENST00000219281 PCDHB8Q9UN66 801 aa17.13■□□□□ 0.33
USB1-201ENST00000219281 MYO16Q9Y6X6 1858 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 LCHNA4D1U4 455 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 BTN3A1O00481 513 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 SNAP91O60641 907 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 SNX2O60749 519 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 LDLRP01130 860 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 YAP1P46937 504 aaKnown RBP17.12■□□□□ 0.33
USB1-201ENST00000219281 PARP15Q460N3 678 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 ELMSAN1Q6PJG2 1045 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 TBPL2Q6SJ96 375 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 ZNF280BQ86YH2 543 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 LRRC43Q8N309 656 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 PAPD5Q8NDF8 572 aaKnown RBP17.12■□□□□ 0.33
USB1-201ENST00000219281 OR2T11Q8NH01 316 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 MIPOL1Q8TD10 442 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 PLEKHG4BQ96PX9 1271 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 GPR21Q99679 349 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 HGH1Q9BTY7 390 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 FBXO44Q9H4M3 255 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 RPF2Q9H7B2 306 aaKnown RBP17.12■□□□□ 0.33
USB1-201ENST00000219281 DRGXA6NNA5 263 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 H3BMQ9 156 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 PRAMEF11O60813 436 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 CHEK2O96017 543 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 UROSP10746 265 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 UMPSP11172 480 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms