RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 CD248Q9HCU0 757 aa12.18□□□□□ -0.46
SNU13-201ENST00000215956 CD93Q9NPY3 652 aa12.18□□□□□ -0.46
SNU13-201ENST00000215956 CATSPERZQ9NTU4 200 aa12.18□□□□□ -0.46
SNU13-201ENST00000215956 FGFR1OP2Q9NVK5 253 aa12.18□□□□□ -0.46
SNU13-201ENST00000215956 INTS10Q9NVR2 710 aaKnown RBP12.18□□□□□ -0.46
SNU13-201ENST00000215956 IL1RAPL1Q9NZN1 696 aa12.18□□□□□ -0.46
SNU13-201ENST00000215956 SLC17A6Q9P2U8 582 aa12.18□□□□□ -0.46
SNU13-201ENST00000215956 SLC2A6Q9UGQ3 507 aa12.18□□□□□ -0.46
SNU13-201ENST00000215956 PCOLCE2Q9UKZ9 415 aa12.18□□□□□ -0.46
SNU13-201ENST00000215956 PKP3Q9Y446 797 aa12.18□□□□□ -0.46
SNU13-201ENST00000215956 KNTC1P50748 2209 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 FAM95CA0A1B0GW59 222 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 TTC24A2A3L6 582 aaPredicted RBP12.17□□□□□ -0.46
SNU13-201ENST00000215956 STX7O15400 261 aaKnown RBP12.17□□□□□ -0.46
SNU13-201ENST00000215956 FZD6O60353 706 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 SNX3O60493 162 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 EDF1O60869 148 aaKnown RBP12.17□□□□□ -0.46
SNU13-201ENST00000215956 AHSGP02765 367 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 ZNF140P52738 457 aaPredicted RBP12.17□□□□□ -0.46
SNU13-201ENST00000215956 RAB10P61026 200 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 ECT2LQ008S8 904 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 ASPHQ12797 758 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 TRAF2Q12933 501 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 QPCTQ16769 361 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 FASTKD1Q53R41 847 aaKnown RBP12.17□□□□□ -0.46
SNU13-201ENST00000215956 FAM45BPQ6NSW5 357 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 C22orf39Q6P5X5 142 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 SPATA21Q7Z572 469 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 CILP2Q8IUL8 1156 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 CHPFQ8IZ52 775 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 ARMC2Q8NEN0 867 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 FAM45AQ8TCE6 357 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 PDCD6IPQ8WUM4 868 aaKnown RBP12.17□□□□□ -0.46
SNU13-201ENST00000215956 FOXJ1Q92949 421 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 ERLEC1Q96DZ1 483 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 ZNF641Q96N77 438 aaPredicted RBP12.17□□□□□ -0.46
SNU13-201ENST00000215956 ELAC2Q9BQ52 826 aaKnown RBP12.17□□□□□ -0.46
SNU13-201ENST00000215956 KLHL14Q9P2G3 628 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 DKK4Q9UBT3 224 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 SLC39A10Q9ULF5 831 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 PHTF1Q9UMS5 762 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 MTO1Q9Y2Z2 717 aaKnown RBP12.17□□□□□ -0.46
SNU13-201ENST00000215956 PCDHGC4Q9Y5F7 938 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 ACTL7AQ9Y615 435 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 CHD5Q8TDI0 1954 aa12.17□□□□□ -0.46
SNU13-201ENST00000215956 GOLGA8CPA6NN73 597 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 H7C0S8 307 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 TRIM24O15164 1050 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 CD3EAPO15446 510 aaKnown RBP12.16□□□□□ -0.46
SNU13-201ENST00000215956 HTRA2O43464 458 aaPredicted RBP12.16□□□□□ -0.46
SNU13-201ENST00000215956 POP4O95707 220 aaKnown RBP12.16□□□□□ -0.46
SNU13-201ENST00000215956 GOT2P00505 430 aaKnown RBP12.16□□□□□ -0.46
SNU13-201ENST00000215956 PRLP01236 227 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 ATP5BP06576 529 aaKnown RBP12.16□□□□□ -0.46
SNU13-201ENST00000215956 C2P06681 752 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 BPGMP07738 259 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 SRPRAP08240 638 aaKnown RBP12.16□□□□□ -0.46
SNU13-201ENST00000215956 SRCP12931 536 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 MAOBP27338 520 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 HLA-FP30511 346 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 FOXN2P32314 431 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 SLC26A3P40879 764 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 CTBP1Q13363 440 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 IHHQ14623 411 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 WDR45BQ5MNZ6 344 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 SDE2Q6IQ49 451 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 KLC3Q6P597 504 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 TMPRSS7Q7RTY8 843 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 PTAR1Q7Z6K3 402 aaPredicted RBP12.16□□□□□ -0.46
SNU13-201ENST00000215956 YTHDF3Q7Z739 585 aaKnown RBP12.16□□□□□ -0.46
SNU13-201ENST00000215956 KIAA0907Q7Z7F0 614 aaPredicted RBP12.16□□□□□ -0.46
SNU13-201ENST00000215956 DENND6AQ8IWF6 608 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 RYBPQ8N488 228 aaPredicted RBP12.16□□□□□ -0.46
SNU13-201ENST00000215956 OR4L1Q8NH43 312 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 ZNF398Q8TD17 642 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 SETD7Q8WTS6 366 aaKnown RBP12.16□□□□□ -0.46
SNU13-201ENST00000215956 CDKN2AIPNLQ96HQ2 116 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 ELMO2Q96JJ3 720 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 DNAJC1Q96KC8 554 aaKnown RBP12.16□□□□□ -0.46
SNU13-201ENST00000215956 ACOX2Q99424 681 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 TSSK1BQ9BXA7 367 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 CPEB1Q9BZB8 566 aaKnown RBP12.16□□□□□ -0.46
SNU13-201ENST00000215956 TM6SF2Q9BZW4 377 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 SIRPGQ9P1W8 387 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.16□□□□□ -0.46
SNU13-201ENST00000215956 GGT7Q9UJ14 662 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 ARL2BPQ9Y2Y0 163 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 ACOT9Q9Y305 439 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 ARL5AQ9Y689 179 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 TMEM131Q92545 1883 aa12.16□□□□□ -0.46
SNU13-201ENST00000215956 GOLGA8TH3BQL2 631 aa12.15□□□□□ -0.46
SNU13-201ENST00000215956 PLIN3O60664 434 aa12.15□□□□□ -0.46
SNU13-201ENST00000215956 TGDSO95455 350 aa12.15□□□□□ -0.46
SNU13-201ENST00000215956 GRK2P25098 689 aa12.15□□□□□ -0.46
SNU13-201ENST00000215956 TMPRSS15P98073 1019 aa12.15□□□□□ -0.46
SNU13-201ENST00000215956 MPP1Q00013 466 aa12.15□□□□□ -0.46
SNU13-201ENST00000215956 E2F5Q15329 346 aa12.15□□□□□ -0.46
SNU13-201ENST00000215956 ZKSCAN8Q15776 578 aaPredicted RBP12.15□□□□□ -0.46
SNU13-201ENST00000215956 MYLK3Q32MK0 819 aa12.15□□□□□ -0.46
SNU13-201ENST00000215956 FUT11Q495W5 492 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms