RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 HADHBP55084 474 aaKnown RBP13.48□□□□□ -0.25
SF3A1-201ENST00000215793 CDH4P55283 916 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 AP1S1P61966 158 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 BNC1Q01954 994 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 DRICH1Q6PGQ1 229 aaPredicted RBP13.48□□□□□ -0.25
SF3A1-201ENST00000215793 THAP5Q7Z6K1 395 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 ECHDC2Q86YB7 292 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 HM13Q8TCT9 377 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 BORCS5Q969J3 196 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 FAM83DQ9H4H8 585 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 U3KQV3 271 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 FAM92AA1XBS5 289 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 TSPAN1O60635 241 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 TOP3BO95985 862 aaKnown RBP13.48□□□□□ -0.25
SF3A1-201ENST00000215793 SP100P23497 879 aaPredicted RBP13.48□□□□□ -0.25
SF3A1-201ENST00000215793 RPIAP49247 311 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 RAB25P57735 213 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 SF1Q15637 639 aaKnown RBP13.48□□□□□ -0.25
SF3A1-201ENST00000215793 HKDC1Q2TB90 917 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 BICRALQ6AI39 1079 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 TMPRSS11AQ6ZMR5 421 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 MOB2Q70IA6 237 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 BEND5Q7L4P6 421 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 ANKRD23Q86SG2 305 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 CLHC1Q8NHS4 586 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 ZNF354BQ96LW1 612 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 UNC93B1Q9H1C4 597 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 PLK2Q9NYY3 685 aa13.48□□□□□ -0.25
SF3A1-201ENST00000215793 EVLQ9UI08 416 aaPredicted RBP13.48□□□□□ -0.25
SF3A1-201ENST00000215793 STX16-NPEPL1H3BU86 382 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 STX16O14662 325 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 PLIN3O60664 434 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 GPIP06744 558 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 UROSP10746 265 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 PNLIPRP1P54315 467 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 EVX2Q03828 476 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 CLCQ05315 142 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 LAPTM5Q13571 262 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 IL23RQ5VWK5 629 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 CHADLQ6NUI6 762 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 GJD3Q8N144 294 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 FAM98AQ8NCA5 519 aaKnown RBP13.47□□□□□ -0.25
SF3A1-201ENST00000215793 CAPSLQ8WWF8 208 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 H3BNX3 289 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 SYN3O14994 580 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 FAM155BO75949 473 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 C22orf31O95567 290 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 NFATC1O95644 943 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 MTHFRP42898 656 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 NDST2P52849 883 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 SPPL2CQ8IUH8 684 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 MFSD3Q96ES6 412 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 CIB1Q99828 191 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 SQORQ9Y6N5 450 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 ABHD14A-ACY1A0A1B0GW23 586 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 CASKO14936 926 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 LAMP2P13473 410 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 TCF4P15884 667 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 IGFBP5P24593 272 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 ITPKBP27987 946 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 DGKZQ13574 1117 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 ZNF567Q8N184 647 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 C11orf65Q8NCR3 313 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 XAGE5Q8WWM1 108 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 LPGAT1Q92604 370 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 C1GALT1C1Q96EU7 318 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 EXO5Q9H790 373 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 NMUR1Q9HB89 426 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 ZNF214Q9UL59 606 aaPredicted RBP13.47□□□□□ -0.25
SF3A1-201ENST00000215793 RAB26Q9ULW5 256 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 RIPK3Q9Y572 518 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 BCL9LQ86UU0 1499 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 TCRBV7S2A1N4TA0A589 114 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 CHST10O43529 356 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 FAUP35544 74 aaKnown RBP13.47□□□□□ -0.25
SF3A1-201ENST00000215793 FSTL1Q12841 308 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 NAE1Q13564 534 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 LARS2Q15031 903 aaKnown RBP13.47□□□□□ -0.25
SF3A1-201ENST00000215793 SWT1Q5T5J6 900 aaKnown RBP13.47□□□□□ -0.25
SF3A1-201ENST00000215793 TMC8Q8IU68 726 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 NAT16Q8N8M0 369 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 SPOCK2Q92563 424 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 MYOCQ99972 504 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 MTRRQ9UBK8 725 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 GPC6Q9Y625 555 aaPredicted RBP13.47□□□□□ -0.25
SF3A1-201ENST00000215793 NEURL4Q96JN8 1562 aa13.47□□□□□ -0.25
SF3A1-201ENST00000215793 CAPN8A6NHC0 703 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 GPR25O00155 361 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 KHDRBS3O75525 346 aaKnown RBP13.46□□□□□ -0.25
SF3A1-201ENST00000215793 SCELO95171 688 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 PRAMEF1O95521 474 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 LDOC1O95751 146 aaPredicted RBP13.46□□□□□ -0.25
SF3A1-201ENST00000215793 APODP05090 189 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 S100GP29377 79 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 MSX2P35548 267 aaPredicted RBP13.46□□□□□ -0.25
SF3A1-201ENST00000215793 SLC20A2Q08357 652 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 ANKS1BQ7Z6G8 1248 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.46□□□□□ -0.25
SF3A1-201ENST00000215793 ARL10Q8N8L6 244 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 OR10H5Q8NGA6 315 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms