RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 BHLHB9Q6PI77 547 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 CHSY3Q70JA7 882 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 TCF12Q99081 682 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 EBPLQ9BY08 206 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 RASSF1Q9NS23 344 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 EHD3Q9NZN3 535 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 ZNF536O15090 1300 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 GTPBP1O00178 669 aaKnown RBP18.72■□□□□ 0.59
MBD3-201ENST00000156825 MFN2O95140 757 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 CCNYL3P0C7X3 344 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 PRG2P13727 222 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 FAM47BQ8NA70 645 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 SLAIN1Q8ND83 568 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 SH3GL2Q99962 352 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 CRISPLD1Q9H336 500 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 NRP1O14786 923 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 RASGRP1O95267 797 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 SRP54P61011 504 aaKnown RBP18.72■□□□□ 0.59
MBD3-201ENST00000156825 PITRM1Q5JRX3 1037 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 CCNYL2Q5T2Q4 361 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 ZNF366Q8N895 744 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 OR13C4Q8NGS5 318 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 ENKURQ8TC29 256 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 EXOSC8Q96B26 276 aaKnown RBP18.72■□□□□ 0.59
MBD3-201ENST00000156825 MAGEH1Q9H213 219 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 PIGVQ9NUD9 493 aa18.72■□□□□ 0.59
MBD3-201ENST00000156825 BMP7P18075 431 aa18.71■□□□□ 0.59
MBD3-201ENST00000156825 KIR3DL1P43629 444 aa18.71■□□□□ 0.59
MBD3-201ENST00000156825 RAB14P61106 215 aa18.71■□□□□ 0.59
MBD3-201ENST00000156825 SRSF11Q05519 484 aaKnown RBP18.71■□□□□ 0.59
MBD3-201ENST00000156825 KRR1Q13601 381 aaKnown RBP18.71■□□□□ 0.59
MBD3-201ENST00000156825 HNRNPDQ14103 355 aaKnown RBP18.71■□□□□ 0.59
MBD3-201ENST00000156825 PERM1Q5SV97 790 aa18.71■□□□□ 0.59
MBD3-201ENST00000156825 GLYATQ6IB77 296 aa18.71■□□□□ 0.59
MBD3-201ENST00000156825 SLC47A1Q96FL8 570 aa18.71■□□□□ 0.59
MBD3-201ENST00000156825 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.71■□□□□ 0.59
MBD3-201ENST00000156825 PCDHB1Q9Y5F3 818 aa18.71■□□□□ 0.59
MBD3-201ENST00000156825 ITPKBP27987 946 aa18.71■□□□□ 0.59
MBD3-201ENST00000156825 SIM2Q14190 667 aaPredicted RBP18.71■□□□□ 0.59
MBD3-201ENST00000156825 ATAT1Q5SQI0 421 aa18.71■□□□□ 0.59
MBD3-201ENST00000156825 CHST15Q7LFX5 561 aaPredicted RBP18.71■□□□□ 0.59
MBD3-201ENST00000156825 R3HCC1LQ7Z5L2 792 aaKnown RBP18.71■□□□□ 0.59
MBD3-201ENST00000156825 KREMEN2Q8NCW0 462 aa18.71■□□□□ 0.59
MBD3-201ENST00000156825 ALG2Q9H553 416 aa18.71■□□□□ 0.59
MBD3-201ENST00000156825 URADA6NGE7 173 aa18.71■□□□□ 0.59
MBD3-201ENST00000156825 SRRM3A6NNA2 597 aaPredicted RBP18.71■□□□□ 0.59
MBD3-201ENST00000156825 TRAFD1O14545 582 aaPredicted RBP18.71■□□□□ 0.59
MBD3-201ENST00000156825 AXIN1O15169 862 aa18.71■□□□□ 0.59
MBD3-201ENST00000156825 CA12O43570 354 aa18.71■□□□□ 0.59
MBD3-201ENST00000156825 IL6P05231 212 aa18.71■□□□□ 0.59
MBD3-201ENST00000156825 POLR2JP52435 117 aaKnown RBP18.71■□□□□ 0.59
MBD3-201ENST00000156825 TLE2Q04725 743 aa18.71■□□□□ 0.59
MBD3-201ENST00000156825 NPLOC4Q8TAT6 608 aa18.71■□□□□ 0.59
MBD3-201ENST00000156825 C2orf80Q0P641 193 aa18.71■□□□□ 0.59
MBD3-201ENST00000156825 ADGRG2Q8IZP9 1017 aa18.71■□□□□ 0.59
MBD3-201ENST00000156825 MSL3Q8N5Y2 521 aaKnown RBP18.71■□□□□ 0.59
MBD3-201ENST00000156825 CLN6Q9NWW5 311 aa18.71■□□□□ 0.59
MBD3-201ENST00000156825 MAP4K5Q9Y4K4 846 aa18.71■□□□□ 0.59
MBD3-201ENST00000156825 LRRC14BA6NHZ5 514 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 M0R2N6 131 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 GDF6Q6KF10 455 aaPredicted RBP18.7■□□□□ 0.58
MBD3-201ENST00000156825 SFRP1Q8N474 314 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 RTKNQ9BST9 563 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 CENPXA8MT69 81 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 YAP1P46937 504 aaKnown RBP18.7■□□□□ 0.58
MBD3-201ENST00000156825 RFX4Q33E94 735 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 BROXQ5VW32 411 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 PQLC1Q8N2U9 271 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 OR52J3Q8NH60 311 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 MRPL39Q9NYK5 338 aaKnown RBP18.7■□□□□ 0.58
MBD3-201ENST00000156825 KLF1Q13351 362 aaPredicted RBP18.7■□□□□ 0.58
MBD3-201ENST00000156825 PAOXQ6QHF9 649 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 AGMOQ6ZNB7 445 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 SIAH1Q8IUQ4 282 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 LPGAT1Q92604 370 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 KAT2AQ92830 837 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 TIFAQ96CG3 184 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 BRINP2Q9C0B6 783 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 INTS7Q9NVH2 962 aaKnown RBP18.7■□□□□ 0.58
MBD3-201ENST00000156825 NFATC1O95644 943 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 UGT1A6P19224 532 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 UGT1A1P22309 533 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 UGT1A4P22310 534 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 UGT1A3P35503 534 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 UGT1A5P35504 534 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 CHIT1Q13231 466 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 OLIG2Q13516 323 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 LSM12Q3MHD2 195 aaKnown RBP18.7■□□□□ 0.58
MBD3-201ENST00000156825 KLHL17Q6TDP4 642 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 KIAA0408Q6ZU52 694 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 CCSER2Q9H7U1 834 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 PTGFRNQ9P2B2 879 aa18.7■□□□□ 0.58
MBD3-201ENST00000156825 PRPF19Q9UMS4 504 aaKnown RBP18.7■□□□□ 0.58
MBD3-201ENST00000156825 AOC2O75106 756 aa18.69■□□□□ 0.58
MBD3-201ENST00000156825 SERPINB7O75635 380 aa18.69■□□□□ 0.58
MBD3-201ENST00000156825 COL6A1P12109 1028 aa18.69■□□□□ 0.58
MBD3-201ENST00000156825 GSTT1P30711 240 aa18.69■□□□□ 0.58
MBD3-201ENST00000156825 RPL3P39023 403 aaKnown RBP18.69■□□□□ 0.58
MBD3-201ENST00000156825 MED22Q15528 200 aa18.69■□□□□ 0.58
MBD3-201ENST00000156825 SLC39A4Q6P5W5 647 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms