RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 TRMT10BQ6PF06 316 aaKnown RBP11.31□□□□□ -0.6
PKP2-201ENST00000070846 EXOC3L1Q86VI1 746 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 DHFR2Q86XF0 187 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 SLC44A1Q8WWI5 657 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 PIGKQ92643 395 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 PIWIL1Q96J94 861 aaKnown RBP11.31□□□□□ -0.6
PKP2-201ENST00000070846 MCCC1Q96RQ3 725 aaPredicted RBP11.31□□□□□ -0.6
PKP2-201ENST00000070846 BRINP2Q9C0B6 783 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 EQTNQ9NQ60 294 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 DDX18Q9NVP1 670 aaKnown RBP11.31□□□□□ -0.6
PKP2-201ENST00000070846 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.31□□□□□ -0.6
PKP2-201ENST00000070846 NCDNQ9UBB6 729 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 UPK3BL1B0FP48 263 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 ANKRD66B4E2M5 251 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 UPK3BL2E5RIL1 263 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 CLDN4O14493 209 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 AXIN1O15169 862 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 DEAF1O75398 565 aaPredicted RBP11.3□□□□□ -0.6
PKP2-201ENST00000070846 LYPLA1O75608 230 aaPredicted RBP11.3□□□□□ -0.6
PKP2-201ENST00000070846 GRIA1P42261 906 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 CLK3P49761 638 aaKnown RBP11.3□□□□□ -0.6
PKP2-201ENST00000070846 STK19P49842 368 aaPredicted RBP11.3□□□□□ -0.6
PKP2-201ENST00000070846 PLA2G16P53816 162 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 UBE3AQ05086 875 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 ITIH4Q14624 930 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 TIGD2Q4W5G0 525 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 CCNYL2Q5T2Q4 361 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 NCBP2-AS2Q69YL0 99 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 TRIM40Q6P9F5 258 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 STK32CQ86UX6 486 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 ATXN2LQ8WWM7 1075 aaKnown RBP11.3□□□□□ -0.6
PKP2-201ENST00000070846 SORCS1Q8WY21 1168 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 CDKN2AIPNLQ96HQ2 116 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 PACSIN3Q9UKS6 424 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 MAPRE3Q9UPY8 281 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 PIAS3Q9Y6X2 628 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 TOPAZ1Q8N9V7 1692 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 COL16A1Q07092 1604 aaPredicted RBP11.3□□□□□ -0.6
PKP2-201ENST00000070846 SLC28A1O00337 649 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 ZMPSTE24O75844 475 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 IPO13O94829 963 aaKnown RBP11.3□□□□□ -0.6
PKP2-201ENST00000070846 ME2P23368 584 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 CTSOP43234 321 aaPredicted RBP11.3□□□□□ -0.6
PKP2-201ENST00000070846 AFF1P51825 1210 aaKnown RBP11.3□□□□□ -0.6
PKP2-201ENST00000070846 PLEKHG4Q58EX7 1191 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 DEPDC1Q5TB30 811 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 TMEM164Q5U3C3 297 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 TRABD2AQ86V40 505 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 NIPA2Q8N8Q9 360 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 FBXO30Q8TB52 745 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 AGAP2Q99490 1192 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 TRMOQ9BU70 441 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 KCNK6Q9Y257 313 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 LRRC14BA6NHZ5 514 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 SAC3D1A6NKF1 404 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 RFXANKO14593 260 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 OAZ2O95190 189 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 RUNX1T1Q06455 604 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 CHRNA6Q15825 494 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 GPR33Q49SQ1 333 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 CAPRIN2Q6IMN6 1127 aaKnown RBP11.3□□□□□ -0.6
PKP2-201ENST00000070846 TTC33Q6PID6 262 aaPredicted RBP11.3□□□□□ -0.6
PKP2-201ENST00000070846 ZNF786Q8N393 782 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 TOP1MTQ969P6 601 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 PYCR2Q96C36 320 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 RBM18Q96H35 190 aaKnown RBP11.3□□□□□ -0.6
PKP2-201ENST00000070846 PRRG3Q9BZD7 231 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 VRTNQ9H8Y1 702 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 ZNF490Q9ULM2 529 aaPredicted RBP11.3□□□□□ -0.6
PKP2-201ENST00000070846 CYP8B1Q9UNU6 501 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 ADAMTS4O75173 837 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 POP7O75817 140 aaKnown RBP11.3□□□□□ -0.6
PKP2-201ENST00000070846 FASP25445 335 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 PTPN4P29074 926 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 LIMK2P53671 638 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 NRG1Q02297 640 aaPredicted RBP11.3□□□□□ -0.6
PKP2-201ENST00000070846 RUNX3Q13761 415 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 SAMD4BQ5PRF9 694 aaKnown RBP11.3□□□□□ -0.6
PKP2-201ENST00000070846 FSTL4Q6MZW2 842 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 RNF44Q7L0R7 432 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 R3HCC1LQ7Z5L2 792 aaKnown RBP11.3□□□□□ -0.6
PKP2-201ENST00000070846 SNX20Q7Z614 316 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 LUZP2Q86TE4 346 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 CUZD1Q86UP6 607 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 ADGRG2Q8IZP9 1017 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 SIDT2Q8NBJ9 832 aaKnown RBP11.3□□□□□ -0.6
PKP2-201ENST00000070846 KLHDC7BQ96G42 594 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 CCT7Q99832 543 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 NOL11Q9H8H0 719 aaKnown RBP11.3□□□□□ -0.6
PKP2-201ENST00000070846 SLC17A7Q9P2U7 560 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 B4GALT6Q9UBX8 382 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 PGAP2Q9UHJ9 254 aa11.3□□□□□ -0.6
PKP2-201ENST00000070846 MTF2Q9Y483 593 aaPredicted RBP11.3□□□□□ -0.6
PKP2-201ENST00000070846 CHURC1-FNTBB4DL54 471 aa11.29□□□□□ -0.6
PKP2-201ENST00000070846 PI15O43692 258 aa11.29□□□□□ -0.6
PKP2-201ENST00000070846 NIPSNAP2O75323 286 aa11.29□□□□□ -0.6
PKP2-201ENST00000070846 KCNH1O95259 989 aa11.29□□□□□ -0.6
PKP2-201ENST00000070846 NUDT17P0C025 328 aa11.29□□□□□ -0.6
PKP2-201ENST00000070846 VAV1P15498 845 aa11.29□□□□□ -0.6
PKP2-201ENST00000070846 GNAZP19086 355 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms