RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 HACD2Q6Y1H2 254 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 SNX20Q7Z614 316 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 TMC8Q8IU68 726 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 PQLC1Q8N2U9 271 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 RNF148Q8N7C7 305 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 RIN3Q8TB24 985 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 EEF1AKMT1Q8WVE0 214 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 PIH1D2Q8WWB5 315 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 ASB9Q96DX5 294 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 LRGUKQ96M69 825 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 SLC30A3Q99726 388 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 HGH1Q9BTY7 390 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 C1QTNF3Q9BXJ4 246 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 ASB8Q9H765 288 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 POLG2Q9UHN1 485 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 SCOCQ9UIL1 159 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 CRLS1Q9UJA2 301 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 PCTPQ9UKL6 214 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 BTRCQ9Y297 605 aa8.19□□□□□ -1.1
VAMP3-201ENST00000054666 LEFTY2O00292 366 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 ANGPT2O15123 496 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 HTRA2O43464 458 aaPredicted RBP8.18□□□□□ -1.1
VAMP3-201ENST00000054666 SMAD6O43541 496 aaKnown RBP8.18□□□□□ -1.1
VAMP3-201ENST00000054666 LILRB3O75022 631 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 BCAS2O75934 225 aaPredicted RBP8.18□□□□□ -1.1
VAMP3-201ENST00000054666 ESRRBO95718 433 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 TSPAN12O95859 305 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 UROSP10746 265 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 IDO1P14902 403 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 TCN1P20061 433 aaPredicted RBP8.18□□□□□ -1.1
VAMP3-201ENST00000054666 RPS3P23396 243 aaKnown RBP eCLIP8.18□□□□□ -1.1
VAMP3-201ENST00000054666 PEX2P28328 305 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 SPAM1P38567 509 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 DPP6P42658 865 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 FOXA1P55317 472 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 LRRC36Q1X8D7 754 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 EML3Q32P44 896 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 UGT3A2Q3SY77 523 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 SAMD4BQ5PRF9 694 aaKnown RBP8.18□□□□□ -1.1
VAMP3-201ENST00000054666 GRAMD4Q6IC98 578 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 PAOXQ6QHF9 649 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 GPRIN3Q6ZVF9 776 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 USP45Q70EL2 814 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 SPATA24Q86W54 205 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 SERPINA9Q86WD7 417 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 HS6ST3Q8IZP7 471 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 MYO1HQ8N1T3 1032 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 PCDH20Q8N6Y1 951 aaKnown RBP8.18□□□□□ -1.1
VAMP3-201ENST00000054666 KREMEN2Q8NCW0 462 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 CATSPER1Q8NEC5 780 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 OR2AP1Q8NGE2 309 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 OR9I1Q8NGQ6 314 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 FIBINQ8TAL6 211 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 HMGCLL1Q8TB92 370 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 ZNF483Q8TF39 744 aaPredicted RBP8.18□□□□□ -1.1
VAMP3-201ENST00000054666 PPP2R3CQ969Q6 453 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 ROPN1LQ96C74 230 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 C3orf30Q96M34 536 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 KCNA7Q96RP8 456 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 CORO1BQ9BR76 489 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 EMILIN2Q9BXX0 1053 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 P2RY12Q9H244 342 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 TNKS2Q9H2K2 1166 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 C11orf49Q9H6J7 331 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 FBRSL1Q9HCM7 1045 aaKnown RBP8.18□□□□□ -1.1
VAMP3-201ENST00000054666 ABCB8Q9NUT2 735 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 RIC8BQ9NVN3 520 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 GALPQ9UBC7 116 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 SLC25A13Q9UJS0 675 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 CROTQ9UKG9 612 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 ADAMTS6Q9UKP5 1117 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 IKZF3Q9UKT9 509 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 DHRS7Q9Y394 339 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 PCDHGA7Q9Y5G6 932 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 TNPO3Q9Y5L0 923 aaKnown RBP8.18□□□□□ -1.1
VAMP3-201ENST00000054666 DENND4CQ5VZ89 1909 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 GLYATL1P3A0A0U1RQE8 302 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 A0A0U1RQS6 177 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 CXorf51AA0A1B0GTR3 108 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 MAGEA13PA6NCF6 341 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 EIF4E1BA6NMX2 242 aaKnown RBP8.18□□□□□ -1.1
VAMP3-201ENST00000054666 H3BNX3 289 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 PPP6CO00743 305 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 CASQ2O14958 399 aaPredicted RBP8.18□□□□□ -1.1
VAMP3-201ENST00000054666 RAD51BO15315 384 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 GPR39O43194 453 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 SMNDC1O75940 238 aaKnown RBP eCLIP8.18□□□□□ -1.1
VAMP3-201ENST00000054666 GLUD1P00367 558 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 ALDOCP09972 364 aaKnown RBP8.18□□□□□ -1.1
VAMP3-201ENST00000054666 LINC00032P0C843 101 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 ACRP10323 421 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 HGFP14210 728 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 CD70P32970 193 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 PSMD8P48556 350 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 CLCN7P51798 805 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 NFATC2Q13469 925 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 LRP8Q14114 963 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 PTPRRQ15256 657 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 TGFBIQ15582 683 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 FBXO48Q5FWF7 155 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms