RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 EPHA3P29320 983 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 CA5AP35218 305 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 NRIP1P48552 1158 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 RAP1GDS1P52306 607 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 COPAP53621 1224 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 KDSRQ06136 332 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 KLF10Q13118 480 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 PFKFB4Q16877 469 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 FAM78AQ5JUQ0 283 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 PTRHD1Q6GMV3 140 aaKnown RBP14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 TMC5Q6UXY8 1006 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 PHTF2Q8N3S3 785 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 FBXO39Q8N4B4 442 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 NAT16Q8N8M0 369 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 VN1R2Q8NFZ6 395 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 EEF1AKMT1Q8WVE0 214 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 ULK4Q96C45 1275 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 LINGO1Q96FE5 620 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 ASIC4Q96FT7 647 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 KLHL32Q96NJ5 620 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 SHCBP1LQ9BZQ2 653 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 GDE1Q9NZC3 331 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 NFKBIL1Q9UBC1 381 aaPredicted RBP14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 B4GALT6Q9UBX8 382 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 CRLS1Q9UJA2 301 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 PLA2G4CQ9UP65 541 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 TRAF6Q9Y4K3 522 aa14.18□□□□□ -0.14
RTFDC1-201ENST00000023939 IGLV3-16A0A075B6K0 115 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 TMEM233B4DJY2 109 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 SUPT3HB4E1H0 165 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 TRIM24O15164 1050 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 DCXO43602 365 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 BNIP3LO60238 219 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 SUPT3HO75486 399 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 NFATC1O95644 943 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 JUNP05412 331 aaKnown RBP14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 C1SP09871 688 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 CYP2A6P11509 494 aaPredicted RBP14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 GFAPP14136 432 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 FSHRP23945 695 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 CPOXP36551 454 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 SPINT3P49223 89 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 BTKQ06187 659 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 HERC3Q15034 1050 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 PDCD2Q16342 344 aaPredicted RBP14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 CHSY3Q70JA7 882 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 SUGP1Q8IWZ8 645 aaKnown RBP14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 CPNE9Q8IYJ1 553 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 CLYBLQ8N0X4 340 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 CEP70Q8NHQ1 597 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 MCUR1Q96AQ8 359 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 TNFRSF12AQ9NP84 129 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 ZDHHC3Q9NYG2 299 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 MYO7AQ13402 2215 aa14.17□□□□□ -0.14
RTFDC1-201ENST00000023939 GOLGA8QA0A0J9YX86 632 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 GOLGA8OA6NCC3 632 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 NPEPPSL1A6NEC2 478 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 A8MUI8 341 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 TTC34A8MYJ7 566 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 GOLGA8NF8WBI6 632 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 TULP3O75386 442 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 CDK14O94921 469 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 UGT1A6P19224 532 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 UGT1A1P22309 533 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 UGT1A4P22310 534 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 VIPR1P32241 457 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 UGT1A3P35503 534 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 UGT1A5P35504 534 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 VIPR2P41587 438 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 NSG1P42857 185 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 MAGEA10P43363 369 aaPredicted RBP14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 CPA2P48052 419 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 DCDC1P59894 354 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 UGT3A2Q3SY77 523 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 GPRC6AQ5T6X5 926 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 ANKS6Q68DC2 871 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 ADAMTSL2Q86TH1 951 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 GPSM1Q86YR5 675 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 PELI3Q8N2H9 469 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 CYB5D2Q8WUJ1 264 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 PBXIP1Q96AQ6 731 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 BOCQ9BWV1 1114 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 CIPCQ9C0C6 399 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 RAD18Q9NS91 495 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 SMOXQ9NWM0 555 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 NUDT4Q9NZJ9 180 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 BAIAP2L1Q9UHR4 511 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 ATG2AQ2TAZ0 1938 aa14.16□□□□□ -0.14
RTFDC1-201ENST00000023939 RGSL1A5PLK6 1076 aa14.15□□□□□ -0.14
RTFDC1-201ENST00000023939 IQCF5A8MTL0 148 aa14.15□□□□□ -0.14
RTFDC1-201ENST00000023939 UPK3BL1B0FP48 263 aa14.15□□□□□ -0.14
RTFDC1-201ENST00000023939 UPK3BL2E5RIL1 263 aa14.15□□□□□ -0.14
RTFDC1-201ENST00000023939 NEMP1O14524 444 aa14.15□□□□□ -0.14
RTFDC1-201ENST00000023939 SIX3O95343 332 aaPredicted RBP14.15□□□□□ -0.14
RTFDC1-201ENST00000023939 COX4I1P13073 169 aa14.15□□□□□ -0.14
RTFDC1-201ENST00000023939 PGM1P36871 562 aa14.15□□□□□ -0.14
RTFDC1-201ENST00000023939 PBX2P40425 430 aa14.15□□□□□ -0.14
RTFDC1-201ENST00000023939 RGS4P49798 205 aa14.15□□□□□ -0.14
RTFDC1-201ENST00000023939 SH3BP2P78314 561 aa14.15□□□□□ -0.14
RTFDC1-201ENST00000023939 LCP2Q13094 533 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms