RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Slc5a3Q9JKZ2 718 aa13.16□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 VarsQ9Z1Q9 1263 aaKnown RBP13.16□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Gm3383J3QQ59 259 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Gm3239L7N2D9 227 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 H2-AaP01910 256 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 LtfP08071 707 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Cdh1P09803 884 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 RapsnP12672 412 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Gja1P23242 382 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Guca1aP43081 202 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 HexdcQ3U4H6 486 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Xkr4Q5GH67 647 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Paqr6Q6TCG5 343 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Gpr62Q80UC6 358 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 GmppbQ8BTZ7 360 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 DrgxQ8BYH0 263 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Mtrf1Q8K126 446 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Atg10Q8R1P4 215 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Vmn1r18Q8R2C8 299 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Npffr2Q924H0 417 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 MispQ9D279 648 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Lipo4D3Z608 396 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Daw1D3Z7A5 415 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Vmn2r4K7N784 913 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Vmn2r88L7N1W8 857 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Psmb10O35955 273 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Cd247P24161 164 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Elk4P41158 430 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Olfr538Q7TRT5 310 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Olfr297Q7TS07 310 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Dhx33Q80VY9 698 aaKnown RBP13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Zfp438Q8BFX2 798 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Msantd1Q8BIL2 278 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Mterf2Q8BKY8 385 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Pdcd2lQ8C5N5 364 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Olfr371Q8VGB8 312 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 MrgpreQ91ZB7 310 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Cby3Q9CVN6 235 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Serpinb1aQ9D154 379 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Gpr45Q9EQQ4 373 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 HephQ9Z0Z4 1157 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Fibcd1A2AV25 459 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Gm13119B1ARV5 481 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Matn2O08746 956 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 VegfbP49766 207 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Pex2P55098 305 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Q32M26 199 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Tapt1Q4VBD2 564 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 GkQ64516 559 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Rfx4Q7TNK1 735 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Olfr26Q7TRB7 308 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Q8CDN1 933 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Rnf144aQ925F3 292 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Prpf19Q99KP6 504 aaKnown RBP13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 DhddsQ99KU1 333 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Olfr933Q9EQA0 308 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Tor1bQ9ER41 336 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Trip4Q9QXN3 581 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Mtm1Q9Z2C5 603 aa13.15□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Pkd2l1A2A259 760 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Vmn2r57L7N269 863 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Fam71e2L7N480 754 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 AcrP23578 436 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 LynP25911 512 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Kcnj2P35561 428 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 CskP41241 450 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Nr5a2P45448 560 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Tbx1P70323 479 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Snx21Q3UR97 363 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Mrm3Q5ND52 418 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 PapolgQ6PCL9 739 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Trim36Q80WG7 729 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Chst15Q91XQ5 561 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Rmnd5bQ91YQ7 393 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Il22Q9JJY9 179 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Ncam2O35136 837 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 P01652 108 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Ckmt1P30275 418 aaKnown RBP13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Tnfsf4P43488 198 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Snrpd1P62315 119 aaKnown RBP13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Pou1f1Q00286 291 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Olfr463Q5SW49 311 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Olfr462Q5SW50 311 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Trim17Q7TPM3 477 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Mppe1Q80XL7 396 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Kctd13Q8BGV7 329 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Q8BH50 245 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 4933402J07RikQ8BHX0 270 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 B3gnt7Q8K0J2 397 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Slc29a4Q8R139 528 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Ttc30bQ9CY00 664 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Efhc2Q9D485 750 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Gbe1Q9D6Y9 702 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Psma4Q9R1P0 261 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Gm8011K7N6Y5 207 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Vmn2r112L7N221 857 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Tnk2O54967 1055 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Anxa4P97429 319 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Fam171bQ14CH0 825 aa13.14□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Cyb5r2Q3KNK3 276 aa13.14□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms