RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Patl1Q3TC46 770 aaKnown RBP9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Zfp607aQ3TQG9 686 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Zyg11bQ3UFS0 744 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Thrap3Q569Z6 951 aaKnown RBP9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 UrgcpQ5NCI0 926 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Mrm3Q5ND52 418 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Rab3ipQ68EF0 428 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Olfr1046Q7TR79 316 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 B3gnt5Q8BGY6 376 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Clec1aQ8BWY2 269 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Asrgl1Q8C0M9 326 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Tprg1Q8CB49 279 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Smoc2Q8CD91 447 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Fem1cQ8CEF1 617 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Nckap1lQ8K1X4 1134 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gin1Q8K259 518 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Agr3Q8R3W7 165 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Cox18Q8VC74 331 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Olfr617Q8VGA1 318 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 NlnQ91YP2 704 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Aco2Q99KI0 780 aaKnown RBP9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Cmc1Q9CPZ8 106 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Ist1Q9CX00 362 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Rpl34Q9D1R9 117 aaKnown RBP9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 S100a14Q9D2Q8 104 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Snrnp48Q9D361 337 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 4933425L06RikQ9D3Z8 585 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Ddi1Q9DAF3 408 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Cyp3a44Q9EQW4 504 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Trhr2Q9ERT2 382 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 AgkQ9ESW4 421 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Rfc2Q9WUK4 349 aaKnown RBP9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Slc2a5Q9WV38 501 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Bcl10Q9Z0H7 233 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Osbpl10S4R1M9 766 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Olfr675A0A1B0GSE1 317 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gm10479K7N6H4 105 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Mtnd4P03911 459 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Foxk1P42128 719 aaKnown RBP9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Polr2iP60898 125 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Sap25Q1EHW4 186 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Olfr325Q5NCD2 326 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Zfp78Q5U406 512 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Kcnh1Q60603 989 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Map2k2Q63932 401 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Adamts16Q69Z28 1222 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Tatdn1Q6P8M1 295 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Cfap97Q6ZPR1 541 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Plekha6Q7TQG1 1173 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Rpp38Q80UU2 280 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Sfr1Q8BP27 319 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Olfr801Q8VEU1 318 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Olfr273Q8VG87 317 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Usb1Q91W78 267 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 MmadhcQ99LS1 296 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Katnbl1Q9CWJ3 299 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Rnaseh2aQ9CWY8 301 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Mrpl45Q9D0Q7 306 aaKnown RBP9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 AcadsbQ9DBL1 432 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Epb41l4bQ9JMC8 527 aa9.73□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 TriobpQ99KW3 2014 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Sdc4O35988 198 aaKnown RBP9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Prf1P10820 554 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Sstr4P49660 385 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Ndst2P52850 883 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Pdcd5P56812 126 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 YwhahP68510 246 aaKnown RBP9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Hrh1P70174 488 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 ErfP70459 551 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Kcnab3P97382 249 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Q3KNL4 93 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Znf219Q6IQX8 726 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Magee1Q6PCZ4 918 aaKnown RBP9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Teddm1aQ810U2 305 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Svs2Q8BS30 375 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Cant1Q8VCF1 403 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Ca9Q8VHB5 437 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Cdhr5Q8VHF2 831 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Cdkal1Q91WE6 578 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Slc13a3Q91Y63 600 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Anks3Q9CZK6 655 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Tmbim6Q9D2C7 237 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Leng1Q9DB98 261 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Slc6a21A0A1B0GSD2 748 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Fam131cA2ADB2 273 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Ppef1O35655 650 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 PargO88622 969 aaKnown RBP9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Ccdc153P0C7Q1 202 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Tnfsf4P43488 198 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Smpdl3bP58242 456 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gpatch4Q3TFK5 415 aaKnown RBP9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Trim40Q3UWA4 246 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Uimc1Q5U5Q9 727 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Mef2aQ60929 498 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gngt2Q61017 69 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Chil6Q80W26 440 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Metap1Q8BP48 386 aaKnown RBP9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Ldhal6bQ8BVP2 382 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Psapl1Q8C1C1 522 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Cacnb2Q8CC27 655 aa9.72□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 62.2 ms