RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Nfatc2Q60591 927 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Il10raQ61727 575 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Pabpc2Q62029 628 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 CilpQ66K08 1184 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Klhl23Q6GQU2 558 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Scaf4Q6PFF0 1209 aaKnown RBP8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Wfikkn2Q7TQN3 571 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Sumf2Q8BPG6 308 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 4921511C20RikQ8BVT7 469 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Mettl3Q8C3P7 580 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Wdr26Q8C6G8 641 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Abcf3Q8K268 709 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 HnrnplQ8R081 586 aaKnown RBP8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Olfr695Q8VFM3 315 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Zdhhc7Q91WU6 308 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Slc44a3Q921V7 656 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Tekt2Q922G7 430 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Dhrs7bQ99J47 323 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Mrps9Q9D7N3 390 aaKnown RBP8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 P2yr13Q9D8I2 337 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Jam2Q9JI59 298 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Spag6Q9JLI7 507 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 AicdaQ9WVE0 198 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 E9Q0B3 247 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Vmn2r65G3X931 845 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Vmn2r112L7N221 857 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Serpina3kP07759 418 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 HmgclP38060 325 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Cd9P40240 226 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ccr7P47774 378 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Cyp2a12P56593 492 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Rpl26P61255 145 aaKnown RBP8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 CtscP97821 462 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 F8a1Q00558 380 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Cpne9Q1RLL3 553 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 SbplQ3TUY3 232 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Esrp1Q3US41 680 aaKnown RBP8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Fam160a1Q505K2 1081 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Eif2dQ61211 570 aaKnown RBP8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Kiaa0895Q7TQE7 519 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 DdnQ80TS7 710 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ubap1Q8BH48 502 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 DseQ8BLI4 958 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Plin5Q8BVZ1 463 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 AgpsQ8C0I1 645 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Acat2Q8CAY6 397 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 ItpkaQ8R071 459 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Slc5a9Q8VDT1 685 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Cts3Q91ZD5 332 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Necab2Q91ZP9 389 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Syt12Q920N7 421 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Spz1Q99MY0 378 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Mrfap1Q9CQL7 125 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Bbs2Q9CWF6 721 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 SrpraQ9DBG7 636 aaKnown RBP8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Cngb3Q9JJZ9 694 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Coro1cQ9WUM4 474 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 DnpepQ9Z2W0 473 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ect2lA0A140LIP2 953 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 C2cd2E9Q3C1 696 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 PdgfbP31240 241 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ranbp1P34022 203 aaKnown RBP8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Hnrnpa1P49312 320 aaKnown RBP8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 CdonQ32MD9 1250 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 TraddQ3U0V2 310 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 LcorlQ3U285 600 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Fbxw10Q5SUS0 1030 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Hbs1lQ69ZS7 682 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 GnasQ6R0H7 1133 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Tmem270Q6UJB9 264 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Svs1Q6WIZ7 820 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ccdc116Q80X53 541 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Mppe1Q80XL7 396 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ubp1Q811S7 540 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 HadhaQ8BMS1 763 aaKnown RBP8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Galnt5Q8C102 930 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Olfr398Q8VFY0 314 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Nipal2Q91WC7 383 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Mrgpra2Q91WW4 305 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Trim7Q923T7 510 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Cyp4f15Q99N18 534 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ankrd7Q9D504 279 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 DynapQ9D7M5 161 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Dtwd1Q9D8U7 304 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Psmd12Q9D8W5 456 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 1700109H08RikQ9D9C0 210 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Rasgrp2Q9QUG9 608 aa8.64□□□□□ -1.03
Trim39-201ENSMUST00000042717 Igkv12-98A0A0G2JGF9 115 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Gm13090A2A899 111 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ttc30a2A2AKQ8 664 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Proca1B0QZF7 307 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Kcnc1P15388 511 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Il1rnP25085 178 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 MaxP28574 160 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Pde7aP70453 456 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Klra8Q60682 266 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Dlx3Q64205 287 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ephx4Q6IE26 359 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Abhd10Q6PE15 297 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Nudcd1Q6PIP5 582 aa8.63□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms