RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 MtpnP62774 118 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Gpr15Q0VDU3 360 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Gdpgp1Q3TLS3 386 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Fscn1Q61553 493 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 CcncQ62447 283 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Lingo3Q6GQU6 589 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ddx51Q6P9R1 639 aaKnown RBP13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Prickle2Q80Y24 845 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Teddm1aQ810U2 305 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Morc4Q8BMD7 928 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Csnk1g1Q8BTH8 459 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Piwil2Q8CDG1 971 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Olfr183Q8VFB9 309 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Cyp2c50Q91X77 490 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Pcdhb8Q91XZ2 779 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Gstt3Q99L20 241 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Spcs2Q9CYN2 226 aaKnown RBP13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Tmem135Q9CYV5 458 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Hddc3Q9D114 179 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Snrnp48Q9D361 337 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Cyp3a44Q9EQW4 504 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Plxna1P70206 1894 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 L3mbtl1A2A5N8 826 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Gm13040A2A8C4 496 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Gm13101A2ASJ0 481 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Gm13119B1ARV5 481 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 S100zB9EJL3 99 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ptchd4B9EKX1 904 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Sec22bO08547 215 aaKnown RBP13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ctnnd2O35927 1247 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Limk2O54785 638 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Klf10O89091 479 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Pou5f1P20263 352 aaKnown RBP13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Gdf7P43029 461 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Cdh9P70407 786 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Krt2Q3TTY5 707 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Esrp1Q3US41 680 aaKnown RBP13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Vps51Q3UVL4 782 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Rbl1Q64701 1063 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Olfr667Q7TRP4 326 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Fstl5Q8BFR2 847 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Cars2Q8BYM8 551 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Lacc1Q8BZT9 430 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Tspan33Q8R3S2 283 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ttc39cQ8VE09 580 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Rnf167Q91XF4 347 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ergic3Q9CQE7 383 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 AasdhpptQ9CQF6 309 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Rpl34Q9D1R9 117 aaKnown RBP13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Adad2Q9D5P4 478 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Hcar2Q9EP66 360 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Wdr46Q9Z0H1 622 aaKnown RBP13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 TriqkB2B9E1 86 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Vmn2r17E9PYF5 849 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Gm8011K7N6Y5 207 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Pik3cdO35904 1043 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 PargO88622 969 aaKnown RBP13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Eno2P17183 434 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Apex1P28352 317 aaKnown RBP13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Anxa5P48036 319 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 TsnQ62348 228 aaKnown RBP13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 DazlQ64368 298 aaKnown RBP13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Pex11gQ6P6M5 241 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Maml1Q6T264 1020 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Mtmr12Q80TA6 747 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Prdx6bQ8BG37 224 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Slc49a3Q8CE47 516 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Acap1Q8K2H4 740 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Atp13a2Q9CTG6 1169 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Kif12Q9D2Z8 642 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 S100pbpQ9D5K4 396 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Alg13Q9D8C3 1166 aaKnown RBP13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Pik3cgQ9JHG7 1102 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Gm3604A0A087WPN2 559 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Wfdc16A2A5H4 111 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Slc16a6B1AT66 607 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Spata31E9QAF0 1014 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Olfr1022L7MTT3 315 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Polr2jO08740 117 aaKnown RBP13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 RfngO09009 332 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Btnl2O70355 454 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 ApoeP08226 311 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Etv4P28322 485 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Brcc3P46737 291 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Sstr4P49660 385 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 ZbbxQ0P5X5 716 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Tead4Q62296 427 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Senp5Q6NXL6 749 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 RimklaQ6PFX8 380 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Rpp38Q80UU2 280 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Hmgxb4Q80Y32 594 aaKnown RBP13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Tex13c3Q810P0 219 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Prox2Q8BII1 593 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Pdcd2lQ8C5N5 364 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Nox1Q8CIZ9 591 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Zbtb6Q8K088 423 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Olfr330Q8VGD9 315 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Gins4Q99LZ3 223 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Tmem9Q9CR23 183 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Hm13Q9D8V0 378 aa13.33□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms