RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 PdhxQ8BKZ9 501 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Tma7Q8K003 64 aaKnown RBP16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Trpv3Q8K424 791 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Hid1Q8R1F6 788 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Tmed10Q9D1D4 219 aaKnown RBP16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Efhd2Q9D8Y0 240 aaKnown RBP16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 Rai2Q9QVY8 529 aa16.12■□□□□ 0.17
Trim28-201ENSMUST00000005705 ThadaA8C756 1938 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Nccrp1G3X9C2 266 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Gm10479K7N6H4 105 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 NapsaO09043 419 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Itga11P61622 1188 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 YwhahP68510 246 aaKnown RBP16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Q3KNL4 93 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Bend6Q6PFX2 281 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Olfr801Q8VEU1 318 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Sult5a1Q91X36 291 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Chaf1bQ9D0N7 572 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Mrpl45Q9D0Q7 306 aaKnown RBP16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Rpl9-ps1S4R1R7 191 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Arrdc4A0A0B4J1F4 415 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Fam124aD3Z5V4 536 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Phf12Q5SPL2 1003 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 TCAIMQ66JZ4 499 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Serpina12Q7TMF5 413 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Olfr1198Q7TR12 308 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Mmgt2Q8R3L0 123 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Olfr273Q8VG87 317 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Znf622Q91VY9 476 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 PrkxQ922R0 355 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Rnf144aQ925F3 292 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Oxct2bQ9ESL0 520 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Oxct2aQ9JJN4 520 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 D7h11orf16Q9JJR6 402 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Il20Q9JKV9 176 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Abhd1Q9QZC8 412 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 H2afb2S4R1M3 115 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Gm28363A0A087WQW2 129 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Cd151O35566 253 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 LatO54957 242 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 GhrP16882 650 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Pax7P47239 503 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 CtswP56203 371 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Polr2iP60898 125 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Ctps1P70698 591 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Dusp11Q6NXK5 321 aaKnown RBP16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Inppl1Q6P549 1257 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 MtbpQ8BJS8 894 aaKnown RBP16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Gramd1aQ8VEF1 722 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Mta3Q924K8 591 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Slc13a2Q9ES88 586 aa16.11■□□□□ 0.17
Trim28-201ENSMUST00000005705 Stam2O88811 523 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Jak3Q62137 1100 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Ifit3Q64345 403 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Pcsk9Q80W65 694 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Slc7a4Q8BLQ7 635 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Sept11Q8C1B7 431 aaKnown RBP16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Cstf2tQ8C7E9 632 aaKnown RBP16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Slc35e2Q8C811 405 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Hmgcll1Q8JZS7 343 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Lrrc17Q9CXD9 443 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Rsph14Q9D3W1 341 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Tnfsf13Q9D777 241 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Ninj2Q9JL89 143 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Nme4Q9WV84 186 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Prr14lE9Q7C4 1971 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Ccdc194A0A140LIT1 234 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Vmn2r88L7N1W8 857 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 WarsP32921 481 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 AdslP54822 484 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 MtpnP62774 118 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Hrh1P70174 488 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Ddx4Q61496 702 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Ston2Q8BZ60 895 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Ugt2b34Q8K154 532 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 BfarQ8R079 450 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Pqbp1Q91VJ5 263 aaKnown RBP16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Pcdha8Q91Y12 946 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Cmtm6Q9CZ69 183 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Cdkn2aipnlQ9D211 116 aaKnown RBP16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Plod2Q9R0B9 737 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Carm1Q9WVG6 608 aa16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 Bag6Q9Z1R2 1154 aaKnown RBP16.1■□□□□ 0.17
Trim28-201ENSMUST00000005705 OgdhlE9Q7L0 1029 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Gm16427J3QN52 483 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Igf2bp1O88477 577 aaKnown RBP16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Kcnj2P35561 428 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 TgfbiP82198 683 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Alg6Q3TAE8 507 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Yy2Q3TTC2 378 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Tp53i13Q5F267 385 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Fam72aQ8BFZ8 149 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Kcnv1Q8BZN2 503 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 4932411N23RikQ8C0S0 470 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Batf2Q8R1H8 277 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Anks3Q9CZK6 655 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Ten1Q9D7K2 161 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 GatmQ9D964 423 aaKnown RBP16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Bpifa3Q9D9J8 232 aa16.09■□□□□ 0.17
Trim28-201ENSMUST00000005705 Cyhr1Q9QXA1 311 aa16.09■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms