RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Anks3Q9CZK6 655 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Q9D3J9 298 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Armc1Q9D7A8 282 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Col24a1Q30D77 1733 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Scn8aQ9WTU3 1978 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Zar1lC3VD30 291 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Zfp758E9QAA1 583 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Gm3138K7N754 218 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Mknk1O08605 427 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Pou5f1P20263 352 aaKnown RBP16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 IqcmQ149I8 489 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Lrrc58Q3UGP9 366 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 GstcdQ5RL51 634 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Slc6a4Q60857 630 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Olfr301Q7TS04 311 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Amigo2Q80ZD9 519 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 NcaphQ8C156 731 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Cstf2tQ8C7E9 632 aaKnown RBP16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Taf10Q8K0H5 218 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Kcnc4Q8R1C0 628 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Mmgt2Q8R3L0 123 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Akr1c13Q8VC28 323 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Zdhhc12Q8VC90 267 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 VitQ8VHI5 650 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Znf622Q91VY9 476 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 MmadhcQ99LS1 296 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Glod4Q9CPV4 298 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Zmynd12A2BGJ5 363 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Gm5415E9PXF3 478 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Gm17175E9Q528 179 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Olfr726E9Q8X3 321 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Oaz2O08608 189 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Cct8P42932 548 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Cdkn2bP55271 130 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Olfr725Q05A45 321 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Mocs1Q5RKZ7 636 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Mtmr12Q80TA6 747 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 IfneQ80ZF2 192 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Camk1dQ8BW96 385 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Acsl5Q8JZR0 683 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Spon1Q8VCC9 807 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Dhrs4Q99LB2 279 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 H2bfmQ9DAB5 224 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Ifi30Q9ESY9 248 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Ap1m2Q9WVP1 423 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Sept5Q9Z2Q6 369 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Gm3604A0A087WPN2 559 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 4930402K13RikB1AW18 415 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Vmn2r120E9PX34 856 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Dthd1E9PZX1 795 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Gm21738J3QP72 227 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Gm10479K7N6H4 105 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 ErfP70459 551 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Wbp2P97765 261 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Colec11Q3SXB8 272 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Tmem173Q3TBT3 378 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 MelkQ61846 643 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Fnip1Q68FD7 1165 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 FicdQ8BIX9 458 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Bend5Q8C6D4 421 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Vps50Q8CI71 964 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Stk32cQ8QZV4 488 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Ppp1r8Q8R3G1 351 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Olfr570Q8VH12 312 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Lrrc40Q9CRC8 602 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Tomm70Q9CZW5 611 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Leng1Q9DB98 261 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Rgs3Q9DC04 966 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Rab13Q9DD03 202 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Pias4Q9JM05 507 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Actl7aQ9QY84 440 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Carm1Q9WVG6 608 aa16.31■□□□□ 0.2
Shh-201ENSMUST00000002708 Fbrsl1E9Q9T0 1031 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Igf2bp1O88477 577 aaKnown RBP16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Usp2O88623 613 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Myf6P15375 242 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 EsrrgP62509 458 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Tuba4aP68368 448 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Pdap1Q3UHX2 181 aaKnown RBP16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Q3V0E1 1183 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Gm5800Q497L3 186 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Nr2c1Q505F1 590 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Slc39a4Q78IQ7 660 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Btnl1Q7TST0 509 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Spata7Q80VP2 582 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Kirrel1Q80W68 789 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Mpp7Q8BVD5 576 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Fbxo48Q8CAT8 161 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Smap1Q91VZ6 440 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Usb1Q91W78 267 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Il22bQ9JJY8 179 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Rai2Q9QVY8 529 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Adam23Q9R1V7 829 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Gsk3bQ9WV60 420 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Gm42715A0A087WP63 3095 aaKnown RBP16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Gm28363A0A087WQW2 129 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Tbkbp1A2A9T0 611 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Rhbdl2A2AGA4 302 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Olfr414E9Q5P8 317 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Gm10477F6SW83 55 aa16.3■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms