RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 EIF2B4Q9UI10 523 aaKnown RBP12.86□□□□□ -0.35
PHGDH-218ENST00000641491 MBD1Q9UIS9 605 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-218ENST00000641491 GNPTGQ9UJJ9 305 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 HS3ST3A1Q9Y663 406 aa12.86□□□□□ -0.35
PHGDH-218ENST00000641491 DNAH14Q0VDD8 3507 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 ZCWPW2A0A1B0GU75 182 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 OR51F1A6NGY5 319 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 POC1B-GALNT4F8VUJ3 575 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 H3BMM5 538 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 LATO43561 262 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 KRT37O76014 449 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 OR56A5P0C7T3 313 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 MYCLP1P12525 358 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-218ENST00000641491 TDGF1P13385 188 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 VCLP18206 1134 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 ACRV1P26436 265 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 TEAD1P28347 426 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 NSG1P42857 185 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 CD151P48509 253 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 ARSDP51689 593 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 AFF3P51826 1226 aaKnown RBP12.85□□□□□ -0.35
PHGDH-218ENST00000641491 YPEL5P62699 121 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 RACK1P63244 317 aaKnown RBP12.85□□□□□ -0.35
PHGDH-218ENST00000641491 CREB5Q02930 508 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 OVGP1Q12889 678 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 ITIH4Q14624 930 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 WSCD2Q2TBF2 565 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 ATP13A5Q4VNC0 1218 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 PMS2CLQ68D20 193 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 SLC26A11Q86WA9 606 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 SERPINA9Q86WD7 417 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 LRRC6Q86X45 466 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 NXPE1Q8N323 547 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 FRMD1Q8N878 549 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 TP53I13Q8NBR0 393 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-218ENST00000641491 BTN2A2Q8WVV5 523 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 KLHDC7BQ96G42 594 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 FCRL3Q96P31 734 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-218ENST00000641491 CPNE1Q99829 537 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 TRIM56Q9BRZ2 755 aaKnown RBP12.85□□□□□ -0.35
PHGDH-218ENST00000641491 SMOXQ9NWM0 555 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 ZDHHC3Q9NYG2 299 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 IL1RAPL1Q9NZN1 696 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 GMEB2Q9UKD1 530 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 OR1A2Q9Y585 309 aa12.85□□□□□ -0.35
PHGDH-218ENST00000641491 ZNF292O60281 2723 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 ANKRD36A6QL64 1941 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 H3BM21 787 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 BCAT2O15382 392 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-218ENST00000641491 VEGFDO43915 354 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 UGT1A9O60656 530 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 IGHV4-34P06331 123 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 THEGLP0DJG4 465 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 UGT1A6P19224 532 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 UGT1A1P22309 533 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 UGT1A4P22310 534 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 CD38P28907 300 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 SPRP35270 261 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-218ENST00000641491 UGT1A3P35503 534 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 UGT1A5P35504 534 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 IGFALSP35858 605 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 HSD17B3P37058 310 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 SLC1A2P43004 574 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 PTGER3P43115 390 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 EIF3BP55884 814 aaKnown RBP12.84□□□□□ -0.35
PHGDH-218ENST00000641491 CLDN2P57739 230 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 CDK3Q00526 305 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 CBLBQ13191 982 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 SRSF5Q13243 272 aaKnown RBP12.84□□□□□ -0.35
PHGDH-218ENST00000641491 MSLNQ13421 630 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-218ENST00000641491 PEX6Q13608 980 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 PDE1CQ14123 709 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-218ENST00000641491 PUM1Q14671 1186 aaKnown RBP eCLIP12.84□□□□□ -0.35
PHGDH-218ENST00000641491 TMED2Q15363 201 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 KBTBD12Q3ZCT8 623 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 PLK5Q496M5 336 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 SYTL3Q4VX76 610 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 GPRC6AQ5T6X5 926 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 STRA8Q7Z7C7 330 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 GALNT13Q8IUC8 556 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 TRAPPC5Q8IUR0 188 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 MAML2Q8IZL2 1156 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-218ENST00000641491 CEP76Q8TAP6 659 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 HNRNPLLQ8WVV9 542 aaKnown RBP12.84□□□□□ -0.35
PHGDH-218ENST00000641491 PIGKQ92643 395 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 EID2BQ96D98 161 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 SGSM3Q96HU1 749 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 VPS39Q96JC1 886 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 ZNF514Q96K75 400 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-218ENST00000641491 WDR92Q96MX6 357 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 SLC6A18Q96N87 628 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 APOOQ9BUR5 198 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 ACSS3Q9H6R3 686 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 UGT1A7Q9HAW7 530 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 UGT1A10Q9HAW8 530 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 UGT1A8Q9HAW9 530 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 KLQ9UEF7 1012 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 CORO1CQ9ULV4 474 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-218ENST00000641491 PCDHB1Q9Y5F3 818 aa12.84□□□□□ -0.35
PHGDH-218ENST00000641491 CEP250Q9BV73 2442 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms