RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-238	ENST00000638514	NME7	Q9Y5B8	376 aa		13.6	□□□□□ -0.23
KCNMA1-238	ENST00000638514	CEP350	Q5VT06	3117 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	HTR1A	P08908	422 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	IQCF3	P0C7M6	154 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	BDNF	P23560	247 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	FUT11	Q495W5	492 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	ZNF470	Q6ECI4	717 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	STK32C	Q86UX6	486 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	SPNS2	Q8IVW8	549 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	DCP1B	Q8IZD4	617 aa	Known RBP	13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	CLYBL	Q8N0X4	340 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	SH3GL1	Q99961	368 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	NUAK1	O60285	661 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	RECQL4	O94761	1208 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	INMT	O95050	263 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	ITIH1	P19827	911 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	IMPDH1	P20839	514 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	ELMOD1	Q8N336	334 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	APPL2	Q8NEU8	664 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	CALML6	Q8TD86	181 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	IL12RB2	Q99665	862 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	DPEP3	Q9H4B8	488 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	ABT1	Q9ULW3	272 aa	Known RBP	13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	UBXN8	O00124	270 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	SLC22A1	O15245	554 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	TBC1D4	O60343	1298 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	JCHAIN	P01591	159 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	ALPL	P05186	524 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	TPI1	P60174	286 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	ADIG	Q0VDE8	80 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	LAMC2	Q13753	1193 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	MEP1A	Q16819	746 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	COQ5	Q5HYK3	327 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	RBM20	Q5T481	1227 aa	Known RBP	13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	FAAH2	Q6GMR7	532 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	CHDH	Q8NE62	594 aa	Predicted RBP	13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	PPHLN1	Q8NEY8	458 aa	Known RBP	13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	OR6Q1	Q8NGQ2	317 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	BPIFB1	Q8TDL5	484 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	GLMN	Q92990	594 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	TMBIM1	Q969X1	311 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	VAT1	Q99536	393 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	HOXD1	Q9GZZ0	328 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	DSE	Q9UL01	958 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	PCDHGA8	Q9Y5G5	932 aa		13.59	□□□□□ -0.23
KCNMA1-238	ENST00000638514	PSMD3	O43242	534 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	B3GAT3	O94766	335 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	MATN4	O95460	622 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	APLP1	P51693	650 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	GP2	P55259	537 aa	Known RBP	13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	GRB7	Q14451	532 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	DPY19L1	Q2PZI1	675 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	OTUD1	Q5VV17	481 aa	Predicted RBP	13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	NEK10	Q6ZWH5	1172 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	GPC2	Q8N158	579 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	C2CD4A	Q8NCU7	369 aa	Predicted RBP	13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	TXNDC15	Q96J42	360 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	UBXN10	Q96LJ8	280 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	TEKT5	Q96M29	485 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	CCDC90B	Q9GZT6	254 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	TOR3A	Q9H497	397 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	CPNE5	Q9HCH3	593 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	FBXO5	Q9UKT4	447 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	SDK1	Q7Z5N4	2213 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	CENPF	P49454	3210 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	ZNF99	A8MXY4	864 aa	Predicted RBP	13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	ZBTB42	B2RXF5	422 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	FAM72C	H0Y354	149 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	NTRK1	P04629	796 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	TOP3A	Q13472	1001 aa	Predicted RBP	13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	TAF12	Q16514	161 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	FAM72A	Q5TYM5	149 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	FAM72D	Q6L9T8	149 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	FAM72B	Q86X60	149 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	RIOX2	Q8IUF8	465 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	ZNF555	Q8NEP9	628 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	AURKB	Q96GD4	344 aa	Predicted RBP	13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	NOL6	Q9H6R4	1146 aa	Known RBP	13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	NTN4	Q9HB63	628 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	TBC1D14	Q9P2M4	693 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	PCDHB3	Q9Y5E6	796 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	PTGDR2	Q9Y5Y4	395 aa		13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	OAS3	Q9Y6K5	1087 aa	Known RBP	13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	COL11A1	P12107	1806 aa	Predicted RBP	13.58	□□□□□ -0.24
KCNMA1-238	ENST00000638514	TNPO2	O14787	897 aa	Known RBP	13.57	□□□□□ -0.24
KCNMA1-238	ENST00000638514	DAB1	O75553	588 aa		13.57	□□□□□ -0.24
KCNMA1-238	ENST00000638514	GABARAP	O95166	117 aa		13.57	□□□□□ -0.24
KCNMA1-238	ENST00000638514	ARNT	P27540	789 aa		13.57	□□□□□ -0.24
KCNMA1-238	ENST00000638514	EEFSEC	P57772	596 aa	Known RBP	13.57	□□□□□ -0.24
KCNMA1-238	ENST00000638514	CDC20	Q12834	499 aa		13.57	□□□□□ -0.24
KCNMA1-238	ENST00000638514	WDR45B	Q5MNZ6	344 aa		13.57	□□□□□ -0.24
KCNMA1-238	ENST00000638514	BLOC1S3	Q6QNY0	202 aa		13.57	□□□□□ -0.24
KCNMA1-238	ENST00000638514	NDNF	Q8TB73	568 aa		13.57	□□□□□ -0.24
KCNMA1-238	ENST00000638514	ZNF486	Q96H40	463 aa	Predicted RBP	13.57	□□□□□ -0.24
KCNMA1-238	ENST00000638514	NODAL	Q96S42	347 aa		13.57	□□□□□ -0.24
KCNMA1-238	ENST00000638514	BCL7B	Q9BQE9	202 aa		13.57	□□□□□ -0.24
KCNMA1-238	ENST00000638514	DDIT4	Q9NX09	232 aa		13.57	□□□□□ -0.24
KCNMA1-238	ENST00000638514	RBPJL	Q9UBG7	517 aa		13.57	□□□□□ -0.24
KCNMA1-238	ENST00000638514	PARP14	Q460N5	1801 aa		13.57	□□□□□ -0.24
KCNMA1-238	ENST00000638514	LOC105371267	A0A1B0GV96	52 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms