RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 TARS2Q9BW92 718 aaKnown RBP19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 FARSBQ9NSD9 589 aaKnown RBP19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 MT-CO1P00395 513 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 GPR158Q5T848 1215 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 PPP1R13LQ8WUF5 828 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 SUSD6Q92537 303 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 DPF3Q92784 378 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 GPATCH1Q9BRR8 931 aaKnown RBP19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 CIB4A0PJX0 185 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 TSTD3H0UI37 97 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 DDX6P26196 483 aaKnown RBP eCLIP19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 WEE1P30291 646 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 GRK1Q15835 563 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 BCL2A1Q16548 175 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 EFCAB3Q8N7B9 438 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 ALG9Q9H6U8 611 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 WASF2Q9Y6W5 498 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 ARSJQ5FYB0 599 aaPredicted RBP19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 FAM46CQ5VWP2 391 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 EGFLAMQ63HQ2 1017 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 ASB18Q6ZVZ8 466 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 LSM14AQ8ND56 463 aaKnown RBP19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 TUBE1Q9UJT0 475 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 MINPP1Q9UNW1 487 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 COLEC10Q9Y6Z7 277 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 CSTF1Q05048 431 aaKnown RBP19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 ANKHQ9HCJ1 492 aa19.25■□□□□ 0.67
CACNA1A-257ENST00000638009 PAEPP09466 180 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 ZNF823P16415 610 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 CCDC28AQ8IWP9 274 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 FAM105AQ9NUU6 356 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 I3L521 148 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 LARGE1O95461 756 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 SP140Q13342 867 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 RAD9BQ6WBX8 426 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 C1QTNF3-AMACRE9PGA6 284 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 MMP14P50281 582 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 E2F1Q01094 437 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 POLR3BQ9NW08 1133 aaPredicted RBP19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 ABCA9Q8IUA7 1624 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 NMT2O60551 498 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 SLC2A2P11168 524 aaPredicted RBP19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 CETPP11597 493 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 LCN1P31025 176 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 NKD1Q969G9 470 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 ATP13A1Q9HD20 1204 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 SEMA4BQ9NPR2 832 aaPredicted RBP19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 EDARQ9UNE0 448 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 PXDNLA1KZ92 1463 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 NDUFA9Q16795 377 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 ASB15Q8WXK1 588 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 EZH1Q92800 747 aaPredicted RBP19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 ZSCAN5AQ9BUG6 496 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 RGCCQ9H4X1 137 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 RNF17Q9BXT8 1623 aaKnown RBP19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 RAB39AQ14964 217 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 TPGS1Q6ZTW0 290 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 PSTKQ8IV42 348 aaKnown RBP19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 CERS2Q96G23 380 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 LPIN3Q9BQK8 851 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 CD320Q9NPF0 282 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 A0A0A0MRY4 1105 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 RASGRP1O95267 797 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 PRAMEF12O95522 483 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 ALDH2P05091 517 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 PRKCDQ05655 676 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 XKR4Q5GH76 650 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 RD3Q7Z3Z2 195 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 HCAR2Q8TDS4 363 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 SPATA13Q96N96 652 aa19.24■□□□□ 0.67
CACNA1A-257ENST00000638009 KELP23276 732 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 HMGCS2P54868 508 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 SULT2A1Q06520 285 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 PPP1R15BQ5SWA1 713 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 TMPRSS11EQ9UL52 423 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 ZSCAN5BA6NJL1 495 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 EFCAB9A8MZ26 197 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 RORAP35398 523 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 CYP2U1Q7Z449 544 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 FAM131BQ86XD5 332 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 C5orf34Q96MH7 638 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 FAM83DQ9H4H8 585 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 SLC39A1Q9NY26 324 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 GRIA2P42262 883 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 ITGA7Q13683 1181 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 ZSWIM2Q8NEG5 633 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 CLPTM1LQ96KA5 538 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 CLDN4O14493 209 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 NKRFO15226 690 aaKnown RBP eCLIP19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 SLC35G4P0C7Q5 338 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 MASP1P48740 699 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 TAF1CQ15572 869 aaPredicted RBP19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 USP30Q70CQ3 517 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 ZNF527Q8NB42 609 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 C9orf43Q8TAL5 461 aaPredicted RBP19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 DNASE1L2Q92874 299 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 SCP2D1Q9UJQ7 156 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 METTL21AQ8WXB1 218 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 TRIM43Q96BQ3 446 aaPredicted RBP19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 PSKH2Q96QS6 385 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms