RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 BMPERQ8N8U9 685 aa18.27■□□□□ 0.52
CLN6-220ENST00000637450 OR8K1Q8NGG5 319 aa18.27■□□□□ 0.52
CLN6-220ENST00000637450 SLC35G2Q8TBE7 412 aa18.27■□□□□ 0.52
CLN6-220ENST00000637450 TRIB3Q96RU7 358 aa18.27■□□□□ 0.52
CLN6-220ENST00000637450 DNAJC7Q99615 494 aa18.27■□□□□ 0.52
CLN6-220ENST00000637450 HERPUD2Q9BSE4 406 aa18.27■□□□□ 0.52
CLN6-220ENST00000637450 SLC12A9Q9BXP2 914 aa18.27■□□□□ 0.52
CLN6-220ENST00000637450 XPO4Q9C0E2 1151 aaKnown RBP18.27■□□□□ 0.52
CLN6-220ENST00000637450 CARD9Q9H257 536 aa18.27■□□□□ 0.52
CLN6-220ENST00000637450 ZFYVE1Q9HBF4 777 aa18.27■□□□□ 0.52
CLN6-220ENST00000637450 HEY1Q9Y5J3 304 aa18.27■□□□□ 0.52
CLN6-220ENST00000637450 KIR2DS5A0A0G2JLQ3 304 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 A0A0G2JNG1 304 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 SSU72P8A0A1W2PR75 194 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 LRRD1A4D1F6 860 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 KIR2DS3K7RE56 304 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 GRID2O43424 1007 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 SLC2A4P14672 509 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 PPM1FP49593 454 aaPredicted RBP18.26■□□□□ 0.51
CLN6-220ENST00000637450 CLCNKAP51800 687 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 EPHA4P54764 986 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 RAB15P59190 212 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 GALNT3Q14435 633 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 KIR2DS5Q14953 304 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 FAM182AQ5T1J6 154 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 ANKS6Q68DC2 871 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 CACNA2D3Q8IZS8 1091 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 IL22RA1Q8N6P7 574 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 GPR26Q8NDV2 337 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 NCSTNQ92542 709 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 IMP4Q96G21 291 aaKnown RBP18.26■□□□□ 0.51
CLN6-220ENST00000637450 SPRY4Q9C004 299 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 FAM117AQ9C073 453 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 ZMYND15Q9H091 742 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 STN1Q9H668 368 aaKnown RBP18.26■□□□□ 0.51
CLN6-220ENST00000637450 ATXN10Q9UBB4 475 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 HEMK1Q9Y5R4 338 aaPredicted RBP18.26■□□□□ 0.51
CLN6-220ENST00000637450 ADGRG1Q9Y653 693 aa18.26■□□□□ 0.51
CLN6-220ENST00000637450 SDK2Q58EX2 2172 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 OR5K4A6NMS3 321 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 A8MU76 341 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 PYCARD-AS1I3L0S3 204 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 SNX2O60749 519 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 TPM3P06753 285 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 F3P13726 295 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 ZNF8P17098 575 aaPredicted RBP18.25■□□□□ 0.51
CLN6-220ENST00000637450 ARHGAP25P42331 645 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 MC2RQ01718 297 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 AP1B1Q10567 949 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 PDK1Q15118 436 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 SNAP47Q5SQN1 464 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 PRICKLE2Q7Z3G6 844 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 KDELC2Q7Z4H8 507 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 TMC3Q7Z5M5 1100 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 NT5DC3Q86UY8 548 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 TADA1Q96BN2 335 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 TEFMQ96QE5 360 aaKnown RBP18.25■□□□□ 0.51
CLN6-220ENST00000637450 SPATA16Q9BXB7 569 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 MAK16Q9BXY0 300 aaKnown RBP18.25■□□□□ 0.51
CLN6-220ENST00000637450 CEP41Q9BYV8 373 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.25■□□□□ 0.51
CLN6-220ENST00000637450 OR2AG1Q9H205 316 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 DEF6Q9H4E7 631 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 MAGEE1Q9HCI5 957 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 TRIM39Q9HCM9 518 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 ARFGAP3Q9NP61 516 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 PRDM8Q9NQV8 689 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 PILRAQ9UKJ1 303 aa18.25■□□□□ 0.51
CLN6-220ENST00000637450 APOL1O14791 398 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 RAD1O60671 282 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 SLC25A14O95258 325 aaPredicted RBP18.24■□□□□ 0.51
CLN6-220ENST00000637450 WISP1O95388 367 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 LIFP15018 202 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 DCDC1P59894 354 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 KCNC4Q03721 635 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 CDK18Q07002 472 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 CLCA4Q14CN2 919 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 ZNF648Q5T619 568 aaPredicted RBP18.24■□□□□ 0.51
CLN6-220ENST00000637450 PHYKPLQ8IUZ5 450 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 TRAM1L1Q8N609 369 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.24■□□□□ 0.51
CLN6-220ENST00000637450 RTP4Q96DX8 246 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 AGAP3Q96P47 875 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 OLFM3Q96PB7 478 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 ZSCAN5AQ9BUG6 496 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 SLC25A51Q9H1U9 297 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 EPB41L1Q9H4G0 881 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 CLMPQ9H6B4 373 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 FBXO8Q9NRD0 319 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 RAD18Q9NS91 495 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 KLC4Q9NSK0 619 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 GEMIN8Q9NWZ8 242 aaKnown RBP18.24■□□□□ 0.51
CLN6-220ENST00000637450 CPNE7Q9UBL6 633 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 SHOC2Q9UQ13 582 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 MYO18BQ8IUG5 2567 aa18.24■□□□□ 0.51
CLN6-220ENST00000637450 GPR89AB7ZAQ6 455 aa18.23■□□□□ 0.51
CLN6-220ENST00000637450 CHUKO15111 745 aa18.23■□□□□ 0.51
CLN6-220ENST00000637450 AKR1B10O60218 316 aa18.23■□□□□ 0.51
CLN6-220ENST00000637450 MTA2O94776 668 aa18.23■□□□□ 0.51
CLN6-220ENST00000637450 PIRTP0C851 137 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms