RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 CARNS1A5YM72 827 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 TGDSO95455 350 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 CCR10P46092 362 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 SEMA3AQ14563 771 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 RALGPS1Q5JS13 557 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 RBM23Q86U06 439 aaKnown RBP11.47□□□□□ -0.57
CLN6-217ENST00000636964 TMEM151BQ8IW70 566 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 CMTM8Q8IZV2 173 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 FSTL5Q8N475 847 aaPredicted RBP11.47□□□□□ -0.57
CLN6-217ENST00000636964 LINC00469Q8N7U9 141 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 FLCNQ8NFG4 579 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 OR4K2Q8NGD2 314 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 GDPD5Q8WTR4 605 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 RPL10LQ96L21 214 aaKnown RBP11.47□□□□□ -0.57
CLN6-217ENST00000636964 GCNAQ96QF7 691 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 TDRD1Q9BXT4 1180 aaKnown RBP11.47□□□□□ -0.57
CLN6-217ENST00000636964 ZNF711Q9Y462 761 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 OR51B4Q9Y5P0 310 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 A0A1W2PQ67 120 aa11.46□□□□□ -0.57
CLN6-217ENST00000636964 TTC34A8MYJ7 566 aa11.46□□□□□ -0.57
CLN6-217ENST00000636964 PRR5-ARHGAP8B1AHC4 643 aa11.46□□□□□ -0.57
CLN6-217ENST00000636964 BNIP3LO60238 219 aa11.46□□□□□ -0.57
CLN6-217ENST00000636964 SIN3BO75182 1162 aa11.46□□□□□ -0.57
CLN6-217ENST00000636964 PAPSS2O95340 614 aaPredicted RBP11.46□□□□□ -0.57
CLN6-217ENST00000636964 S1PR4O95977 384 aa11.46□□□□□ -0.57
CLN6-217ENST00000636964 EPOP01588 193 aa11.46□□□□□ -0.57
CLN6-217ENST00000636964 EPCAMP16422 314 aa11.46□□□□□ -0.57
CLN6-217ENST00000636964 ARHGAP8P85298 464 aa11.46□□□□□ -0.57
CLN6-217ENST00000636964 TRAF2Q12933 501 aa11.46□□□□□ -0.57
CLN6-217ENST00000636964 UBAP2LQ14157 1087 aaKnown RBP11.46□□□□□ -0.57
CLN6-217ENST00000636964 CSHL1Q14406 222 aa11.46□□□□□ -0.57
CLN6-217ENST00000636964 TEAD2Q15562 447 aa11.46□□□□□ -0.57
CLN6-217ENST00000636964 CALML6Q8TD86 181 aa11.46□□□□□ -0.57
CLN6-217ENST00000636964 TSNARE1Q96NA8 513 aa11.46□□□□□ -0.57
CLN6-217ENST00000636964 EBF4Q9BQW3 602 aa11.46□□□□□ -0.57
CLN6-217ENST00000636964 GRIP2Q9C0E4 1043 aa11.46□□□□□ -0.57
CLN6-217ENST00000636964 MAN1C1Q9NR34 630 aa11.46□□□□□ -0.57
CLN6-217ENST00000636964 SLC30A1Q9Y6M5 507 aa11.46□□□□□ -0.57
CLN6-217ENST00000636964 H3BNX3 289 aa11.46□□□□□ -0.58
CLN6-217ENST00000636964 GRM6O15303 877 aa11.46□□□□□ -0.58
CLN6-217ENST00000636964 SLC7A4O43246 635 aa11.46□□□□□ -0.58
CLN6-217ENST00000636964 GLP2RO95838 553 aa11.46□□□□□ -0.58
CLN6-217ENST00000636964 SERPINE1P05121 402 aa11.46□□□□□ -0.58
CLN6-217ENST00000636964 SBK3P0C264 359 aa11.46□□□□□ -0.58
CLN6-217ENST00000636964 CD70P32970 193 aa11.46□□□□□ -0.58
CLN6-217ENST00000636964 CLCN4P51793 760 aa11.46□□□□□ -0.58
CLN6-217ENST00000636964 SLC25A3Q00325 362 aa11.46□□□□□ -0.58
CLN6-217ENST00000636964 ASPHQ12797 758 aa11.46□□□□□ -0.58
CLN6-217ENST00000636964 RFTN1Q14699 578 aaPredicted RBP11.46□□□□□ -0.58
CLN6-217ENST00000636964 HTR3DQ70Z44 454 aa11.46□□□□□ -0.58
CLN6-217ENST00000636964 GLT6D1Q7Z4J2 308 aa11.46□□□□□ -0.58
CLN6-217ENST00000636964 TMEM151AQ8N4L1 468 aa11.46□□□□□ -0.58
CLN6-217ENST00000636964 ALG14Q96F25 216 aa11.46□□□□□ -0.58
CLN6-217ENST00000636964 SHCBP1LQ9BZQ2 653 aa11.46□□□□□ -0.58
CLN6-217ENST00000636964 MFSD1Q9H3U5 465 aa11.46□□□□□ -0.58
CLN6-217ENST00000636964 TLR9Q9NR96 1032 aa11.46□□□□□ -0.58
CLN6-217ENST00000636964 DNMT3BQ9UBC3 853 aaKnown RBP11.46□□□□□ -0.58
CLN6-217ENST00000636964 LHX3Q9UBR4 397 aa11.46□□□□□ -0.58
CLN6-217ENST00000636964 PCDHB9Q9Y5E1 797 aa11.46□□□□□ -0.58
CLN6-217ENST00000636964 LINC01553A4QN01 128 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 CD3EAPO15446 510 aaKnown RBP11.45□□□□□ -0.58
CLN6-217ENST00000636964 COL6A2P12110 1019 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 HADHAP40939 763 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 LEPRP48357 1165 aaKnown RBP11.45□□□□□ -0.58
CLN6-217ENST00000636964 CD97P48960 835 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 CSRP3P50461 194 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 SLC7A9P82251 487 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 FOLH1Q04609 750 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 LMAN2Q12907 356 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 CBX2Q14781 532 aaPredicted RBP11.45□□□□□ -0.58
CLN6-217ENST00000636964 FAM109BQ6ICB4 259 aaPredicted RBP11.45□□□□□ -0.58
CLN6-217ENST00000636964 PIM3Q86V86 326 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 EFCAB3Q8N7B9 438 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 CDKN2AIPNLQ96HQ2 116 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 KLHL4Q9C0H6 718 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 TNKS2Q9H2K2 1166 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 XPR1Q9UBH6 696 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 HCFC2Q9Y5Z7 792 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 GFRA2O00451 464 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 CTPS1P17812 591 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 S100A5P33763 92 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 CDKN1CP49918 316 aaPredicted RBP11.45□□□□□ -0.58
CLN6-217ENST00000636964 CDKN2DP55273 166 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 MYBPC1Q00872 1141 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 CAMK1Q14012 370 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 MMEL1Q495T6 779 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 HECTD2Q5U5R9 776 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 TRIM67Q6ZTA4 783 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 CAMK1DQ8IU85 385 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 GPR65Q8IYL9 337 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 HEXDCQ8WVB3 486 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 RILPQ96NA2 401 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 SORT1Q99523 831 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 SIKE1Q9BRV8 207 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 FAM96AQ9H5X1 160 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 CERS4Q9HA82 394 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 EVLQ9UI08 416 aaPredicted RBP11.45□□□□□ -0.58
CLN6-217ENST00000636964 ANKRD36A6QL64 1941 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 CAPN8A6NHC0 703 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 ANKRD66B4E2M5 251 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms