RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 APOLD1Q96LR9 279 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 ZNF226Q9NYT6 803 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 GLYATL1P3A0A0U1RQE8 302 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 TREHO43280 583 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 SEMA3DO95025 777 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 SLC7A1P30825 629 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 MAPK8P45983 427 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 CWF19L1Q69YN2 538 aaKnown RBP17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 STARD8Q92502 1023 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 CRELD1Q96HD1 420 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 RBCK1Q9BYM8 510 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 PCDH9Q9HC56 1237 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 MYRFQ9Y2G1 1151 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 DGKBQ9Y6T7 804 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 IDSP22304 550 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 CLCN7P51798 805 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 SNAPC1Q16533 368 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 FOXR2Q6PJQ5 311 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 POLMQ9NP87 494 aaPredicted RBP17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 FAM172BPA6NC97 362 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 F7P08709 466 aaPredicted RBP17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 LPOP22079 712 aaPredicted RBP17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 PTPN9P43378 593 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 METTL3Q86U44 580 aaKnown RBP17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 ZNF75CPQ92670 426 aaPredicted RBP17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 TTTY10Q9BZA0 68 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 IRF2BPLQ9H1B7 796 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 FAM105AQ9NUU6 356 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 ATG13O75143 517 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 ZNF268Q14587 947 aaPredicted RBP17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 FAM83AQ86UY5 434 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 CST11Q9H112 138 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 PLCL2Q9UPR0 1127 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 TULP4Q9NRJ4 1543 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 CLTCL1P53675 1640 aa17.75■□□□□ 0.43
CACNA1A-227ENST00000636549 SLC35F4A4IF30 521 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 PARP6Q2NL67 630 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 LDLRAP1Q5SW96 308 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 C10orf107Q8IVU9 208 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 LPIN3Q9BQK8 851 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 SLC33A1O00400 549 aaPredicted RBP17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 LDB2O43679 373 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 CHN2P52757 468 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 TSPAN5P62079 268 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 ALYREFQ86V81 257 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 AIF1LQ9BQI0 150 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 CENPMQ9NSP4 180 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 RXRGP48443 463 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 NOGQ13253 232 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 TRIM28Q13263 835 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 QPRTQ15274 297 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 DCLRE1AQ6PJP8 1040 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 THAP5Q7Z6K1 395 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 TMEM151BQ8IW70 566 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 BTBD10Q9BSF8 475 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 MORF4L1Q9UBU8 362 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 MGAT4AQ9UM21 535 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 RBMX2Q9Y388 322 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 CLDN4O14493 209 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 MSCO60682 206 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 TGFB3P10600 412 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 GLRA2P23416 452 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 CLCNKBP51801 687 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 POF1BQ8WVV4 589 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 GSC2O15499 205 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 EPHA3P29320 983 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 GLIS3Q8NEA6 775 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 NCSTNQ92542 709 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 TMEM27Q9HBJ8 222 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 HCN2Q9UL51 889 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 A6NCN8 305 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 ADRA1DP25100 572 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 MTX3Q5HYI7 312 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 USB1Q9BQ65 265 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 C9orf16Q9BUW7 83 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 SMG9Q9H0W8 520 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 CA14Q9ULX7 337 aa17.74■□□□□ 0.43
CACNA1A-227ENST00000636549 G3V2T6 193 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 HSF2Q03933 536 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 LSM12Q3MHD2 195 aaKnown RBP17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 TMEM220Q6QAJ8 160 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 KIAA0895Q8NCT3 520 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 OR6K6Q8NGW6 343 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 FCRL2Q96LA5 508 aaPredicted RBP17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 FTHL17Q9BXU8 183 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 ABCB8Q9NUT2 735 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 IFT52Q9Y366 437 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 CARNS1A5YM72 827 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 FGF10O15520 208 aaPredicted RBP17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 SERPINB7O75635 380 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 CABYRO75952 493 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 ZMYND11Q15326 602 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 EARS2Q5JPH6 523 aaKnown RBP17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 CPTPQ5TA50 214 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 GK5Q6ZS86 529 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 ZDHHC17Q8IUH5 632 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 MEIOBQ8N635 442 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 OR4K2Q8NGD2 314 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 GFM1Q96RP9 751 aaKnown RBP17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 KIAA1683Q9H0B3 1180 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms