RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 SFRP1Q8N474 314 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 AGBL5Q8NDL9 886 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 RCBTB1Q8NDN9 531 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 SNRNP27Q8WVK2 155 aaKnown RBP17.75■□□□□ 0.43
PNKP-225ENST00000636214 P3H4Q92791 437 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 OR2AG1Q9H205 316 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 CARD9Q9H257 536 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 OSGEPL1Q9H4B0 414 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 MAGEE1Q9HCI5 957 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 ST14Q9Y5Y6 855 aa17.75■□□□□ 0.43
PNKP-225ENST00000636214 OAS3Q9Y6K5 1087 aaKnown RBP17.75■□□□□ 0.43
PNKP-225ENST00000636214 IGHV5-10-1A0A0J9YXX1 117 aa17.74■□□□□ 0.43
PNKP-225ENST00000636214 GPR89AB7ZAQ6 455 aa17.74■□□□□ 0.43
PNKP-225ENST00000636214 PMPCBO75439 489 aa17.74■□□□□ 0.43
PNKP-225ENST00000636214 IPO7O95373 1038 aaKnown RBP17.74■□□□□ 0.43
PNKP-225ENST00000636214 NDST3O95803 873 aa17.74■□□□□ 0.43
PNKP-225ENST00000636214 PIRTP0C851 137 aa17.74■□□□□ 0.43
PNKP-225ENST00000636214 GPR89BP0CG08 455 aa17.74■□□□□ 0.43
PNKP-225ENST00000636214 PTPN3P26045 913 aa17.74■□□□□ 0.43
PNKP-225ENST00000636214 ETV5P41161 510 aa17.74■□□□□ 0.43
PNKP-225ENST00000636214 CDKN2BP42772 138 aa17.74■□□□□ 0.43
PNKP-225ENST00000636214 LIMK2P53671 638 aa17.74■□□□□ 0.43
PNKP-225ENST00000636214 CFHR1Q03591 330 aa17.74■□□□□ 0.43
PNKP-225ENST00000636214 TFDP3Q5H9I0 405 aa17.74■□□□□ 0.43
PNKP-225ENST00000636214 CCDC181Q5TID7 509 aa17.74■□□□□ 0.43
PNKP-225ENST00000636214 SPOCD1Q6ZMY3 1216 aa17.74■□□□□ 0.43
PNKP-225ENST00000636214 TRAM1L1Q8N609 369 aa17.74■□□□□ 0.43
PNKP-225ENST00000636214 ZSCAN1Q8NBB4 408 aa17.74■□□□□ 0.43
PNKP-225ENST00000636214 RBM41Q96IZ5 413 aaKnown RBP17.74■□□□□ 0.43
PNKP-225ENST00000636214 TRIB3Q96RU7 358 aa17.74■□□□□ 0.43
PNKP-225ENST00000636214 FERMT1Q9BQL6 677 aa17.74■□□□□ 0.43
PNKP-225ENST00000636214 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.74■□□□□ 0.43
PNKP-225ENST00000636214 B3GNT4Q9C0J1 378 aa17.74■□□□□ 0.43
PNKP-225ENST00000636214 KLHL8Q9P2G9 620 aaPredicted RBP17.74■□□□□ 0.43
PNKP-225ENST00000636214 FAM153AQ9UHL3 310 aa17.74■□□□□ 0.43
PNKP-225ENST00000636214 CNOT6Q9ULM6 557 aaKnown RBP17.74■□□□□ 0.43
PNKP-225ENST00000636214 ALG6Q9Y672 507 aa17.74■□□□□ 0.43
PNKP-225ENST00000636214 KIR2DS5A0A0G2JLQ3 304 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 A0A0G2JNG1 304 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 OR5K4A6NMS3 321 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 KIR2DS3K7RE56 304 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 NUAK1O60285 661 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 ZRANB2O95218 330 aaKnown RBP eCLIP17.73■□□□□ 0.43
PNKP-225ENST00000636214 MT-CYBP00156 380 aaPredicted RBP17.73■□□□□ 0.43
PNKP-225ENST00000636214 MAPK9P45984 424 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 ATP1A2P50993 1020 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 TBX2Q13207 712 aaPredicted RBP17.73■□□□□ 0.43
PNKP-225ENST00000636214 NFATC2Q13469 925 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 KIR2DS5Q14953 304 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 INSCQ1MX18 579 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 KIAA1614Q5VZ46 1190 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 TMEM71Q6P5X7 295 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 SARM1Q6SZW1 724 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 B4GALNT4Q76KP1 1039 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 ZC3H18Q86VM9 953 aaKnown RBP17.73■□□□□ 0.43
PNKP-225ENST00000636214 ZFAND4Q86XD8 727 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 ZNF761Q86XN6 746 aaPredicted RBP17.73■□□□□ 0.43
PNKP-225ENST00000636214 FAM129CQ86XR2 697 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 CCDC170Q8IYT3 715 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 SPATA22Q8NHS9 363 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 TEKT5Q96M29 485 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 TAAR9Q96RI9 348 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 WDR24Q96S15 920 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 ARFGAP3Q9NP61 516 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 SARS2Q9NP81 518 aaKnown RBP17.73■□□□□ 0.43
PNKP-225ENST00000636214 FOXJ2Q9P0K8 574 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 SSUH2Q9Y2M2 353 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 ATMQ13315 3056 aa17.73■□□□□ 0.43
PNKP-225ENST00000636214 STMND1H3BQB6 276 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 THRAP10827 490 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 F3P13726 295 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 ZNF8P17098 575 aaPredicted RBP17.72■□□□□ 0.43
PNKP-225ENST00000636214 MPSTP25325 297 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 HADHBP55084 474 aaKnown RBP17.72■□□□□ 0.43
PNKP-225ENST00000636214 NAP1L1P55209 391 aaKnown RBP17.72■□□□□ 0.43
PNKP-225ENST00000636214 SQSTM1Q13501 440 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 GTF2H3Q13889 308 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 PRKD1Q15139 912 aaPredicted RBP17.72■□□□□ 0.43
PNKP-225ENST00000636214 LLGL1Q15334 1064 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 TGIF1Q15583 401 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 SNAP47Q5SQN1 464 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 CRTC3Q6UUV7 619 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 ZNF574Q6ZN55 896 aaPredicted RBP17.72■□□□□ 0.43
PNKP-225ENST00000636214 TMC3Q7Z5M5 1100 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 DAAM2Q86T65 1068 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 TRIM48Q8IWZ4 208 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 RCOR2Q8IZ40 523 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 GPR26Q8NDV2 337 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 GDAP1Q8TB36 358 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 GLYATL1Q969I3 302 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 SGF29Q96ES7 293 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 VAT1Q99536 393 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 TRIM39Q9HCM9 518 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 KLC4Q9NSK0 619 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 UBP1Q9NZI7 540 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 ATXN10Q9UBB4 475 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 NFKBIL1Q9UBC1 381 aaPredicted RBP17.72■□□□□ 0.43
PNKP-225ENST00000636214 SAE1Q9UBE0 346 aaPredicted RBP17.72■□□□□ 0.43
PNKP-225ENST00000636214 TBC1D29Q9UFV1 150 aa17.72■□□□□ 0.43
PNKP-225ENST00000636214 PIEZO2Q9H5I5 2752 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms