RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 CCDC112Q8NEF3 446 aa18.77■□□□□ 0.6
CLN6-213ENST00000636212 OR10G6Q8NH81 332 aa18.77■□□□□ 0.6
CLN6-213ENST00000636212 HTR3CQ8WXA8 447 aa18.77■□□□□ 0.6
CLN6-213ENST00000636212 HAUS1Q96CS2 278 aa18.77■□□□□ 0.6
CLN6-213ENST00000636212 SEMA6CQ9H3T2 930 aa18.77■□□□□ 0.6
CLN6-213ENST00000636212 TRABDQ9H4I3 376 aa18.77■□□□□ 0.6
CLN6-213ENST00000636212 CPNE5Q9HCH3 593 aa18.77■□□□□ 0.6
CLN6-213ENST00000636212 TRIM39Q9HCM9 518 aa18.77■□□□□ 0.6
CLN6-213ENST00000636212 NFKBIL1Q9UBC1 381 aaPredicted RBP18.77■□□□□ 0.6
CLN6-213ENST00000636212 TRHDEQ9UKU6 1024 aa18.77■□□□□ 0.6
CLN6-213ENST00000636212 ITPR1Q14643 2758 aa18.77■□□□□ 0.6
CLN6-213ENST00000636212 OR5K4A6NMS3 321 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 H7C0C1 242 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 TK2O00142 265 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 AGRPO00253 132 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 HGSO14964 777 aaPredicted RBP18.76■□□□□ 0.59
CLN6-213ENST00000636212 PPM1DO15297 605 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 SNX2O60749 519 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 CD1CP29017 333 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 FASLGP48023 281 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 ATP5OP48047 213 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 RHDQ02161 417 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 HHEXQ03014 270 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 XRCC4Q13426 336 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 ZDHHC20Q5W0Z9 365 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 CCDC81Q6ZN84 652 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 TXLNBQ8N3L3 684 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 SFRP1Q8N474 314 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 SLC37A2Q8TED4 501 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 GLYATL1Q969I3 302 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 QKIQ96PU8 341 aaKnown RBP eCLIP18.76■□□□□ 0.59
CLN6-213ENST00000636212 PLEKHG4BQ96PX9 1271 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 NUDT22Q9BRQ3 303 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 HEMGNQ9BXL5 484 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 FSD1LQ9BXM9 530 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.76■□□□□ 0.59
CLN6-213ENST00000636212 OR2AG1Q9H205 316 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.76■□□□□ 0.59
CLN6-213ENST00000636212 HACD3Q9P035 362 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 ATXN10Q9UBB4 475 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 RSPH14Q9UHP6 348 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 TFR2Q9UP52 801 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 KCNK6Q9Y257 313 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 PCDHB11Q9Y5F2 797 aa18.76■□□□□ 0.59
CLN6-213ENST00000636212 IGHV1OR21-1A0A087WYE8 117 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 KIR2DS5A0A0G2JLQ3 304 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 A0A0G2JNG1 304 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 MACROD2A1Z1Q3 448 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 CCDC66A2RUB6 948 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 SOWAHDA6NJG2 315 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 APOC4-APOC2K7ER74 178 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 KIR2DS3K7RE56 304 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 ATXN7O15265 892 aaPredicted RBP18.75■□□□□ 0.59
CLN6-213ENST00000636212 DUX1O43812 170 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 STK10O94804 968 aaKnown RBP18.75■□□□□ 0.59
CLN6-213ENST00000636212 EPOP01588 193 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 APOC2P02655 101 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 CSTF2P33240 577 aaKnown RBP eCLIP18.75■□□□□ 0.59
CLN6-213ENST00000636212 WNT3AP56704 352 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 WASHC5Q12768 1159 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 MPP3Q13368 585 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 GTF2H3Q13889 308 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 KIR2DS5Q14953 304 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 INSCQ1MX18 579 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 FAM182AQ5T1J6 154 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 ITPRIPL1Q6GPH6 555 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 BBS12Q6ZW61 710 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 OR4D9Q8NGE8 314 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 EID2BQ96D98 161 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 CCDC74BQ96LY2 380 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 TTC25Q96NG3 672 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 FCRL5Q96RD9 977 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 CCNL2Q96S94 520 aaPredicted RBP18.75■□□□□ 0.59
CLN6-213ENST00000636212 OSGEPL1Q9H4B0 414 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 SARS2Q9NP81 518 aaKnown RBP18.75■□□□□ 0.59
CLN6-213ENST00000636212 ACSL6Q9UKU0 697 aa18.75■□□□□ 0.59
CLN6-213ENST00000636212 CACNA1GO43497 2377 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 IGHV5-10-1A0A0J9YXX1 117 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 LOC285095A0A1B0GVY8 99 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 KMOO15229 486 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 VEGFDO43915 354 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 PTMAP06454 111 aaKnown RBP18.74■□□□□ 0.59
CLN6-213ENST00000636212 LIPCP11150 499 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 F3P13726 295 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 ZNF8P17098 575 aaPredicted RBP18.74■□□□□ 0.59
CLN6-213ENST00000636212 ITIH1P19827 911 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 HLA-DPA1P20036 260 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 CD82P27701 267 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 CTNNA1P35221 906 aaKnown RBP18.74■□□□□ 0.59
CLN6-213ENST00000636212 HMGCLP35914 325 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 MARCKSL1P49006 195 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 LIMK2P53671 638 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 CLN3Q13286 438 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 SQSTM1Q13501 440 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 TAF1BQ53T94 588 aaPredicted RBP18.74■□□□□ 0.59
CLN6-213ENST00000636212 NKAIN2Q5VXU1 208 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 IYDQ6PHW0 289 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 TMPRSS9Q7Z410 1059 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 KIAA1328Q86T90 577 aa18.74■□□□□ 0.59
CLN6-213ENST00000636212 LRRTM4Q86VH4 590 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms