RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 AKAP3O75969 853 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 MTHFRP42898 656 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 LRRC38Q5VT99 294 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 HCAR2Q8TDS4 363 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 C5orf34Q96MH7 638 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 FADS2O95864 444 aaKnown RBP13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 ZNF3P17036 446 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 PPP3CAQ08209 521 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 CERCAMQ5T4B2 595 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 APTXQ7Z2E3 356 aaKnown RBP13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 ZNF554Q86TJ5 538 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 SNX33Q8WV41 574 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 CEP41Q9BYV8 373 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 BRINP2Q9C0B6 783 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 SP140LQ9H930 580 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 CALML5Q9NZT1 146 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 CORO1CQ9ULV4 474 aaPredicted RBP13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 PIGBOS1A0A0B4J2F0 54 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 GNB5O14775 395 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 ARCN1P48444 511 aaKnown RBP13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 PTGR2Q8N8N7 351 aaPredicted RBP13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 SEMA4AQ9H3S1 761 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 RMI1Q9H9A7 625 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 NCANO14594 1321 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 H3BM21 787 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 BPNT1O95861 308 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 PVALBP20472 110 aaPredicted RBP13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 IGFBP4P22692 258 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 RBM34P42696 430 aaKnown RBP13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 SMARCB1Q12824 385 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 SNAPC1Q16533 368 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 TPGS1Q6ZTW0 290 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 SLAIN1Q8ND83 568 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 ZNF606Q8WXB4 792 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 ZNF558Q96NG5 402 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 PHF12Q96QT6 1004 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 ENTPD5O75356 428 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 PIK3CBP42338 1070 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 MAP2K5Q13163 448 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 ZIK1Q3SY52 487 aaPredicted RBP13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 CCNYL2Q5T2Q4 361 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 AAGABQ6PD74 315 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 SVOPLQ8N434 492 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 CPA6Q8N4T0 437 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 TNKS2Q9H2K2 1166 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 PCDHGB2Q9Y5G2 931 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 CLDN4O14493 209 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 MIPP30301 263 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 KHKP50053 298 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 FAAP100Q0VG06 881 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 C16orf59Q7L2K0 433 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 SAPCD2Q86UD0 394 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 HDDC3Q8N4P3 179 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 ENY2Q9NPA8 101 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 INTS10Q9NVR2 710 aaKnown RBP13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 ERVW-1Q9UQF0 538 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 A0A0G2JPF8 293 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 HNRNPCL3B7ZW38 293 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 WFS1O76024 890 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 PET100P0DJ07 73 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 HNRNPCL4P0DMR1 293 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 RNF148Q8N7C7 305 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 ADAM32Q8TC27 787 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 P2RX7Q99572 595 aaKnown RBP13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 DNAJC11Q9NVH1 559 aa13.12□□□□□ -0.31
SYNGAP1-208ENST00000629380 INSRRP14616 1297 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 FSHRP23945 695 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 GPR180Q86V85 440 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 UNC5BQ8IZJ1 945 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 SETD6Q8TBK2 473 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 SGK2Q9HBY8 427 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 GDF3Q9NR23 364 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 SNTG2Q9NY99 539 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 TULP3O75386 442 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 SLC25A14O95258 325 aaPredicted RBP13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 CEP68Q76N32 757 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 PACS2Q86VP3 889 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 TTC29Q8NA56 475 aaPredicted RBP13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 MARK4Q96L34 752 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 ZNF471Q9BX82 626 aaPredicted RBP13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 OR2AT4A6NND4 320 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 LRATO95237 230 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 IGFBP5P24593 272 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 FOLH1Q04609 750 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 PAMR1Q6UXH9 720 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 HOPXQ9BPY8 73 aaPredicted RBP13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 RBM20Q5T481 1227 aaKnown RBP13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 ALLCQ8N6M5 410 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 HPS1Q92902 700 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 MOCS1Q9NZB8 636 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 FKBP7Q9Y680 259 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 ACKR2O00590 384 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 UNC5CO95185 931 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 PTGS2P35354 604 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 MPP2Q14168 576 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 ALKBH2Q6NS38 261 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 HSDL2Q6YN16 418 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 FIBCD1Q8N539 461 aa13.11□□□□□ -0.31
SYNGAP1-208ENST00000629380 DENND6BQ8NEG7 585 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms