RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 CCL22O00626 93 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 INPP4BO15327 924 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 TRIM16O95361 564 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 PRAMEF1O95521 474 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 SOD1P00441 154 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 MYCLP1P12525 358 aaPredicted RBP14.6□□□□□ -0.07
PNKP-221ENST00000627317 KELP23276 732 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 TRIM23P36406 574 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 MAGEA3P43357 314 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 ARRB1P49407 418 aaPredicted RBP14.6□□□□□ -0.07
PNKP-221ENST00000627317 ARL4CP56559 192 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 CDK3Q00526 305 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 GUCY2DQ02846 1103 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 ITGA9Q13797 1035 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 NFATC4Q14934 902 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 CHRNA6Q15825 494 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 HIF1AQ16665 826 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 BBS9Q3SYG4 887 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 TPRG1LQ5T0D9 272 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 ARMC3Q5W041 872 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 MACC1Q6ZN28 852 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 PHYKPLQ8IUZ5 450 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 GATA6Q92908 595 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 FUBP1Q96AE4 644 aaKnown RBP14.6□□□□□ -0.07
PNKP-221ENST00000627317 WDR92Q96MX6 357 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 SCNM1Q9BWG6 230 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 TEX101Q9BY14 249 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 CAAP1Q9H8G2 361 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 MRM3Q9HC36 420 aaKnown RBP14.6□□□□□ -0.07
PNKP-221ENST00000627317 KLK13Q9UKR3 277 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 NEUROG3Q9Y4Z2 214 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 MAD1L1Q9Y6D9 718 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 SLC30A1Q9Y6M5 507 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 ZFHX4Q86UP3 3567 aa14.6□□□□□ -0.07
PNKP-221ENST00000627317 ZNF106Q9H2Y7 1883 aaKnown RBP14.59□□□□□ -0.07
PNKP-221ENST00000627317 ESYT3A0FGR9 886 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 TNFSF14O43557 240 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 HOXC4P09017 264 aaPredicted RBP14.59□□□□□ -0.07
PNKP-221ENST00000627317 ITGALP20701 1170 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 MC4RP32245 332 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 PRAMEP78395 509 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 CAV1Q03135 178 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 INAVAQ3KP66 663 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 ATP13A5Q4VNC0 1218 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 DOK6Q6PKX4 331 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 TRIM74Q86UV6 250 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 PARGQ86W56 976 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 MPP5Q8N3R9 675 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 PEX13Q92968 403 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 GLYATL1Q969I3 302 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 STAMBPL1Q96FJ0 436 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 HIC2Q96JB3 615 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 KIFC1Q9BW19 673 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 CHRAC1Q9NRG0 131 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 GRHL1Q9NZI5 618 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 KLQ9UEF7 1012 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 SLC2A6Q9UGQ3 507 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 SOX13Q9UN79 622 aa14.59□□□□□ -0.07
PNKP-221ENST00000627317 SPTY2D1-AS1A0A0U1RR47 76 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 H7C0S8 307 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 GAPDHSO14556 408 aaPredicted RBP14.58□□□□□ -0.08
PNKP-221ENST00000627317 SRP72O76094 671 aaKnown RBP14.58□□□□□ -0.08
PNKP-221ENST00000627317 SLC25A14O95258 325 aaPredicted RBP14.58□□□□□ -0.08
PNKP-221ENST00000627317 ASMTLO95671 621 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 ARSDP51689 593 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 DRG2P55039 364 aaKnown RBP14.58□□□□□ -0.08
PNKP-221ENST00000627317 PLTPP55058 493 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 DHX9Q08211 1270 aaKnown RBP14.58□□□□□ -0.08
PNKP-221ENST00000627317 BNIP3Q12983 259 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 FZD2Q14332 565 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 TEX35Q5T0J7 233 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 FNBP1LQ5T0N5 605 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 AFTPHQ6ULP2 937 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 ENPP7Q6UWV6 458 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 SLC25A45Q8N413 288 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 CHCHD4Q8N4Q1 142 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 PNPLA1Q8N8W4 532 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 LRRN4CLQ8ND94 238 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 OR13J1Q8NGT2 312 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 OR6P1Q8NGX9 317 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 GDAP1Q8TB36 358 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 ZNF398Q8TD17 642 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 DTX3LQ8TDB6 740 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 BTN2A2Q8WVV5 523 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.58□□□□□ -0.08
PNKP-221ENST00000627317 ZNF669Q96BR6 464 aaPredicted RBP14.58□□□□□ -0.08
PNKP-221ENST00000627317 CDKN2AIPNLQ96HQ2 116 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 TBATAQ96M53 351 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 ZNF778Q96MU6 729 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 VPS35Q96QK1 796 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 LGR4Q9BXB1 951 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 ASB8Q9H765 288 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 EPB41L5Q9HCM4 733 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 FAM114A2Q9NRY5 505 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 DNAJC28Q9NX36 388 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 DMGDHQ9UI17 866 aaKnown RBP14.58□□□□□ -0.08
PNKP-221ENST00000627317 CRLS1Q9UJA2 301 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 MOSPD1Q9UJG1 213 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 DMXL2Q8TDJ6 3036 aa14.58□□□□□ -0.08
PNKP-221ENST00000627317 FAM237BA0A1B0GVD1 139 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms