RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 KIR2DS3K7RE56 304 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 PRAMEF11O60813 436 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 NADKO95544 446 aaPredicted RBP13.69□□□□□ -0.22
SNX1-214ENST00000625244 STSP08842 583 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 AMD1P17707 334 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 HTR1EP28566 365 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 PDE1BQ01064 536 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 GPS2Q13227 327 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 TUBB3Q13509 450 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 PNOCQ13519 176 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 KIR2DS5Q14953 304 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 CCDC14Q49A88 953 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 HGSNATQ68CP4 663 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 IGFL3Q6UXB1 125 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 Q6ZS92 163 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 TECPR1Q7Z6L1 1165 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 TSPAN33Q86UF1 283 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 CDH24Q86UP0 819 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 UMODL1-AS1Q8N2C9 162 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 LZTR1Q8N653 840 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 ENDOVQ8N8Q3 282 aaKnown RBP13.69□□□□□ -0.22
SNX1-214ENST00000625244 TMEM35BQ8NCS4 154 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 RSC1A1Q92681 617 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 FCRL4Q96PJ5 515 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 PLEKHG4BQ96PX9 1271 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 UCK1Q9HA47 277 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 SNX7Q9UNH6 387 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 A0A1B0GUH1 482 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 TTC24A2A3L6 582 aaPredicted RBP13.68□□□□□ -0.22
SNX1-214ENST00000625244 DNAJC6O75061 913 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 PALMO75781 387 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 ASMTLO95671 621 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 PNMA6AP0CW24 399 aaPredicted RBP13.68□□□□□ -0.22
SNX1-214ENST00000625244 ACP5P13686 325 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 EDN3P14138 238 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 SLC2A4P14672 509 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 SLC9A1P19634 815 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 CDH5P33151 784 aaPredicted RBP13.68□□□□□ -0.22
SNX1-214ENST00000625244 SCNN1BP51168 640 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 MARSP56192 900 aaKnown RBP13.68□□□□□ -0.22
SNX1-214ENST00000625244 ATP1A4Q13733 1029 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 ZNF630Q2M218 657 aaPredicted RBP13.68□□□□□ -0.22
SNX1-214ENST00000625244 TRIM65Q6PJ69 517 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 TMEM26Q6ZUK4 368 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 ARCQ7LC44 396 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 FMR1NBQ8N0W7 255 aaPredicted RBP13.68□□□□□ -0.22
SNX1-214ENST00000625244 NXPE1Q8N323 547 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 SLC38A9Q8NBW4 561 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 SCAMP4Q969E2 229 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 SGSM3Q96HU1 749 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 COX14Q96I36 57 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 TIGD1Q96MW7 591 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 AGAP2Q99490 1192 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 ABCG8Q9H221 673 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 LRRC19Q9H756 370 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 ZBTB20Q9HC78 741 aaPredicted RBP13.68□□□□□ -0.22
SNX1-214ENST00000625244 CHST11Q9NPF2 352 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 WASH6PQ9NQA3 447 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 METTL5Q9NRN9 209 aaKnown RBP13.68□□□□□ -0.22
SNX1-214ENST00000625244 RMND1Q9NWS8 449 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 SCHIP1Q9P0W5 487 aaPredicted RBP13.68□□□□□ -0.22
SNX1-214ENST00000625244 AJAP1Q9UKB5 411 aaPredicted RBP13.68□□□□□ -0.22
SNX1-214ENST00000625244 TCFL5Q9UL49 500 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 PIKFYVEQ9Y2I7 2098 aa13.68□□□□□ -0.22
SNX1-214ENST00000625244 NPIPB15A6NHN6 443 aaPredicted RBP13.67□□□□□ -0.22
SNX1-214ENST00000625244 OR5K4A6NMS3 321 aa13.67□□□□□ -0.22
SNX1-214ENST00000625244 PSMD11O00231 422 aa13.67□□□□□ -0.22
SNX1-214ENST00000625244 GADD45BO75293 160 aaPredicted RBP13.67□□□□□ -0.22
SNX1-214ENST00000625244 ATP1A1P05023 1023 aaKnown RBP13.67□□□□□ -0.22
SNX1-214ENST00000625244 EBLN1P0CF75 366 aa13.67□□□□□ -0.22
SNX1-214ENST00000625244 CAPZBP47756 277 aa13.67□□□□□ -0.22
SNX1-214ENST00000625244 RRADP55042 308 aa13.67□□□□□ -0.22
SNX1-214ENST00000625244 PPP1CAP62136 330 aa13.67□□□□□ -0.22
SNX1-214ENST00000625244 PAK1Q13153 545 aa13.67□□□□□ -0.22
SNX1-214ENST00000625244 ZNF235Q14590 738 aa13.67□□□□□ -0.22
SNX1-214ENST00000625244 CYB5D1Q6P9G0 228 aa13.67□□□□□ -0.22
SNX1-214ENST00000625244 CERS6Q6ZMG9 384 aa13.67□□□□□ -0.22
SNX1-214ENST00000625244 BNC2Q6ZN30 1099 aaPredicted RBP13.67□□□□□ -0.22
SNX1-214ENST00000625244 SIDT2Q8NBJ9 832 aaKnown RBP13.67□□□□□ -0.22
SNX1-214ENST00000625244 GPT2Q8TD30 523 aa13.67□□□□□ -0.22
SNX1-214ENST00000625244 GRHL3Q8TE85 626 aa13.67□□□□□ -0.22
SNX1-214ENST00000625244 RXFP2Q8WXD0 754 aa13.67□□□□□ -0.22
SNX1-214ENST00000625244 SPOCK2Q92563 424 aa13.67□□□□□ -0.22
SNX1-214ENST00000625244 AP2M1Q96CW1 435 aa13.67□□□□□ -0.22
SNX1-214ENST00000625244 CELF6Q96J87 481 aaKnown RBP13.67□□□□□ -0.22
SNX1-214ENST00000625244 MLPHQ9BV36 600 aaPredicted RBP13.67□□□□□ -0.22
SNX1-214ENST00000625244 CINPQ9BW66 212 aaPredicted RBP13.67□□□□□ -0.22
SNX1-214ENST00000625244 ZNF552Q9H707 407 aaPredicted RBP13.67□□□□□ -0.22
SNX1-214ENST00000625244 APEX2Q9UBZ4 518 aa13.67□□□□□ -0.22
SNX1-214ENST00000625244 PCDHGC4Q9Y5F7 938 aa13.67□□□□□ -0.22
SNX1-214ENST00000625244 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.67□□□□□ -0.22
SNX1-214ENST00000625244 CSAG2Q9Y5P2 127 aa13.67□□□□□ -0.22
SNX1-214ENST00000625244 CNTRLQ7Z7A1 2325 aa13.67□□□□□ -0.22
SNX1-214ENST00000625244 IGHV5-51A0A0C4DH38 117 aa13.66□□□□□ -0.22
SNX1-214ENST00000625244 HTRA2O43464 458 aaPredicted RBP13.66□□□□□ -0.22
SNX1-214ENST00000625244 CPNE3O75131 537 aaKnown RBP13.66□□□□□ -0.22
SNX1-214ENST00000625244 SMC2O95347 1197 aa13.66□□□□□ -0.22
SNX1-214ENST00000625244 RAB40ALP0C0E4 278 aa13.66□□□□□ -0.22
SNX1-214ENST00000625244 SSTR2P30874 369 aa13.66□□□□□ -0.22
SNX1-214ENST00000625244 SLC19A1P41440 591 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms