RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 GALPQ9UBC7 116 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 ZNF225Q9UK10 706 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 ST14Q9Y5Y6 855 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 CDC7O00311 574 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 NME4O00746 187 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 PFDN6O15212 129 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 FZD6O60353 706 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 VPS26AO75436 327 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 HSPA8P11142 646 aaKnown RBP9.36□□□□□ -0.91
PDPN-212ENST00000621990 ZFP36L2P47974 494 aaKnown RBP9.36□□□□□ -0.91
PDPN-212ENST00000621990 CDKN1CP49918 316 aaPredicted RBP9.36□□□□□ -0.91
PDPN-212ENST00000621990 MYBPC1Q00872 1141 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 ROR2Q01974 943 aaKnown RBP9.36□□□□□ -0.91
PDPN-212ENST00000621990 RCAN2Q14206 197 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 KIF19Q2TAC6 998 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 EML3Q32P44 896 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 CNPY1Q3B7I2 92 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 INO80DQ53TQ3 878 aaPredicted RBP9.36□□□□□ -0.91
PDPN-212ENST00000621990 PSAPL1Q6NUJ1 521 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 NCEH1Q6PIU2 408 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 EFL1Q7Z2Z2 1120 aaKnown RBP9.36□□□□□ -0.91
PDPN-212ENST00000621990 DHFR2Q86XF0 187 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 LPCAT1Q8NF37 534 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 SPDYE1Q8NFV5 336 aaPredicted RBP9.36□□□□□ -0.91
PDPN-212ENST00000621990 OR2T34Q8NGX1 318 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 OR2T3Q8NH03 318 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.36□□□□□ -0.91
PDPN-212ENST00000621990 CCT7Q99832 543 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 BRINP2Q9C0B6 783 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 P2RY12Q9H244 342 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 NDUFA13Q9P0J0 144 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 AFF4Q9UHB7 1163 aaKnown RBP9.36□□□□□ -0.91
PDPN-212ENST00000621990 PCDHGB4Q9UN71 923 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 PCDHGB5Q9Y5G0 923 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 COL4A6Q14031 1691 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 NPEPPSL1A6NEC2 478 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 TBKBP1A7MCY6 615 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 CBX4O00257 560 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 GFRA2O00451 464 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 NR5A2O00482 541 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 ABLIM3O94929 683 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 TNFAIP8O95379 198 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 SEC24AO95486 1093 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 LATS1O95835 1130 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 UROSP10746 265 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 BMP2P12643 396 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 HGFP14210 728 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 MC4RP32245 332 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 PTGER3P43115 390 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 TRAF2Q12933 501 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 NOGQ13253 232 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 VPS26BQ4G0F5 336 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 AARS2Q5JTZ9 985 aaKnown RBP9.36□□□□□ -0.91
PDPN-212ENST00000621990 SYVN1Q86TM6 617 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 CHERPQ8IWX8 916 aaKnown RBP9.36□□□□□ -0.91
PDPN-212ENST00000621990 DDIASQ8IXT1 998 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 ANKFN1Q8N957 763 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 LRTOMTQ8WZ04 291 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 TUBGCP3Q96CW5 907 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 PDLIM5Q96HC4 596 aaKnown RBP9.36□□□□□ -0.91
PDPN-212ENST00000621990 SMIM14Q96QK8 99 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 C19orf43Q9BQ61 176 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 SLC39A3Q9BRY0 314 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 RNF38Q9H0F5 515 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 AIG1Q9NVV5 245 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 LHX3Q9UBR4 397 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 GIMAP2Q9UG22 337 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 FKBPLQ9UIM3 349 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 PADI4Q9UM07 663 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 PCDHGC4Q9Y5F7 938 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 SLC4A7Q9Y6M7 1214 aa9.36□□□□□ -0.91
PDPN-212ENST00000621990 SCN8AQ9UQD0 1980 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 SCN5AQ14524 2016 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 AQP12BA6NM10 295 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 BTN3A1O00481 513 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 E2F3O00716 465 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 OR1I1O60431 355 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 TMCC1O94876 653 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 ESR1P03372 595 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 INHAP05111 366 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 LINC00032P0C843 101 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 SLC6A2P23975 617 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 OR1D2P34982 312 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 PPP3CCP48454 512 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 HK3P52790 923 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 TXNL4AP83876 142 aaKnown RBP9.35□□□□□ -0.91
PDPN-212ENST00000621990 BNIP2Q12982 314 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 APOFQ13790 326 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 IKBKEQ14164 716 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 GEN1Q17RS7 908 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 C6orf52Q5T4I8 152 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 THEMIS2Q5TEJ8 643 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 RNF219Q5W0B1 726 aaPredicted RBP9.35□□□□□ -0.91
PDPN-212ENST00000621990 LCN8Q6JVE9 175 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 HMBOX1Q6NT76 420 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 LAYNQ6UX15 382 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 AQP12AQ8IXF9 295 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 SLC15A3Q8IY34 581 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 GRIN3AQ8TCU5 1115 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 RAET1EQ8TD07 263 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms