RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 RPP25Q9BUL9 199 aaKnown RBP21.29■■□□□ 1
SPAST-204ENST00000621856 BOCQ9BWV1 1114 aa21.29■■□□□ 1
SPAST-204ENST00000621856 DRC3Q9H069 523 aa21.29■■□□□ 1
SPAST-204ENST00000621856 CYP4F12Q9HCS2 524 aa21.29■■□□□ 1
SPAST-204ENST00000621856 ACSS2Q9NR19 701 aa21.29■■□□□ 1
SPAST-204ENST00000621856 PNPOQ9NVS9 261 aa21.29■■□□□ 1
SPAST-204ENST00000621856 TCF20Q9UGU0 1960 aaKnown RBP21.28■■□□□ 1
SPAST-204ENST00000621856 NEMP2A6NFY4 417 aa21.28■■□□□ 1
SPAST-204ENST00000621856 KAT7O95251 611 aa21.28■■□□□ 1
SPAST-204ENST00000621856 RPS3P23396 243 aaKnown RBP eCLIP21.28■■□□□ 1
SPAST-204ENST00000621856 EIF2DP41214 584 aaKnown RBP21.28■■□□□ 1
SPAST-204ENST00000621856 SKIV2L2P42285 1042 aaKnown RBP21.28■■□□□ 1
SPAST-204ENST00000621856 DNAJB13P59910 316 aa21.28■■□□□ 1
SPAST-204ENST00000621856 ZBTB16Q05516 673 aa21.28■■□□□ 1
SPAST-204ENST00000621856 ERAP2Q6P179 960 aa21.28■■□□□ 1
SPAST-204ENST00000621856 ATG14Q6ZNE5 492 aa21.28■■□□□ 1
SPAST-204ENST00000621856 MTSS1LQ765P7 747 aa21.28■■□□□ 1
SPAST-204ENST00000621856 PARS2Q7L3T8 475 aaKnown RBP21.28■■□□□ 1
SPAST-204ENST00000621856 SUSD6Q92537 303 aa21.28■■□□□ 1
SPAST-204ENST00000621856 EXT2Q93063 718 aa21.28■■□□□ 1
SPAST-204ENST00000621856 SLC30A3Q99726 388 aa21.28■■□□□ 1
SPAST-204ENST00000621856 DERL2Q9GZP9 239 aa21.28■■□□□ 1
SPAST-204ENST00000621856 HEY2Q9UBP5 337 aa21.28■■□□□ 1
SPAST-204ENST00000621856 CD84Q9UIB8 345 aa21.28■■□□□ 1
SPAST-204ENST00000621856 A8MT66 165 aa21.27■■□□□ 1
SPAST-204ENST00000621856 IQCF5A8MTL0 148 aa21.27■■□□□ 1
SPAST-204ENST00000621856 SMIM24O75264 130 aa21.27■■□□□ 1
SPAST-204ENST00000621856 APODP05090 189 aa21.27■■□□□ 1
SPAST-204ENST00000621856 ATP6V0D1P61421 351 aa21.27■■□□□ 1
SPAST-204ENST00000621856 CFAP157Q5JU67 520 aa21.27■■□□□ 1
SPAST-204ENST00000621856 DPPA4Q7L190 304 aa21.27■■□□□ 1
SPAST-204ENST00000621856 CD200R1Q8TD46 325 aa21.27■■□□□ 1
SPAST-204ENST00000621856 ULK4Q96C45 1275 aa21.27■■□□□ 1
SPAST-204ENST00000621856 ERP27Q96DN0 273 aa21.27■■□□□ 1
SPAST-204ENST00000621856 MOCOSQ96EN8 888 aa21.27■■□□□ 1
SPAST-204ENST00000621856 CCDC97Q96F63 343 aaPredicted RBP21.27■■□□□ 1
SPAST-204ENST00000621856 SIKE1Q9BRV8 207 aa21.27■■□□□ 1
SPAST-204ENST00000621856 WWP1Q9H0M0 922 aa21.27■■□□□ 1
SPAST-204ENST00000621856 MYLK2Q9H1R3 596 aa21.27■■□□□ 1
SPAST-204ENST00000621856 TMEM245Q9H330 911 aa21.27■■□□□ 1
SPAST-204ENST00000621856 TFB2MQ9H5Q4 396 aaKnown RBP21.27■■□□□ 1
SPAST-204ENST00000621856 MTCH2Q9Y6C9 303 aa21.27■■□□□ 1
SPAST-204ENST00000621856 H3BMM5 538 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 LTBRP36941 435 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 GRIA2P42262 883 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 SPRED3Q2MJR0 410 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 ATP13A5Q4VNC0 1218 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 TRIM67Q6ZTA4 783 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 NUDT18Q6ZVK8 323 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 HSD11B1LQ7Z5J1 315 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 SLC22A9Q8IVM8 553 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 TMIEQ8NEW7 156 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 PIP4K2CQ8TBX8 421 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 CHFRQ96EP1 664 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 MSLNLQ96KJ4 702 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 ILKAPQ9H0C8 392 aaPredicted RBP21.26■□□□□ 0.99
SPAST-204ENST00000621856 ACTR5Q9H9F9 607 aaPredicted RBP21.26■□□□□ 0.99
SPAST-204ENST00000621856 ZDHHC3Q9NYG2 299 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 SARDHQ9UL12 918 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 PLXNB3Q9ULL4 1909 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 NPHS1O60500 1241 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 IPO13O94829 963 aaKnown RBP21.26■□□□□ 0.99
SPAST-204ENST00000621856 CHRNGP07510 517 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 KCNA5P22460 613 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 CORO7P57737 925 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 IL2P60568 153 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 ELAVL3Q14576 367 aaKnown RBP21.26■□□□□ 0.99
SPAST-204ENST00000621856 OR4D1Q15615 310 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 PIWIL4Q7Z3Z4 852 aaKnown RBP21.26■□□□□ 0.99
SPAST-204ENST00000621856 MTDHQ86UE4 582 aaKnown RBP21.26■□□□□ 0.99
SPAST-204ENST00000621856 ZNF781Q8N8C0 355 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 GIMAP7Q8NHV1 300 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 RHEBL1Q8TAI7 183 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 PHF21BQ96EK2 531 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 LINGO1Q96FE5 620 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 SPATA16Q9BXB7 569 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 RAD18Q9NS91 495 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 NCKIPSDQ9NZQ3 722 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 THAP10Q9P2Z0 257 aaPredicted RBP21.26■□□□□ 0.99
SPAST-204ENST00000621856 ZFP69BQ9UJL9 534 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 PRSS21Q9Y6M0 314 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 NUMBLQ9Y6R0 609 aa21.26■□□□□ 0.99
SPAST-204ENST00000621856 AGAP14A8MT82 685 aa21.25■□□□□ 0.99
SPAST-204ENST00000621856 TPBGLP0DKB5 382 aa21.25■□□□□ 0.99
SPAST-204ENST00000621856 ITGB6P18564 788 aa21.25■□□□□ 0.99
SPAST-204ENST00000621856 IL12RB1P42701 662 aa21.25■□□□□ 0.99
SPAST-204ENST00000621856 CCR10P46092 362 aa21.25■□□□□ 0.99
SPAST-204ENST00000621856 KCNC1P48547 511 aa21.25■□□□□ 0.99
SPAST-204ENST00000621856 RALGDSQ12967 914 aa21.25■□□□□ 0.99
SPAST-204ENST00000621856 GALNTL6Q49A17 601 aa21.25■□□□□ 0.99
SPAST-204ENST00000621856 ARL13AQ5H913 290 aaPredicted RBP21.25■□□□□ 0.99
SPAST-204ENST00000621856 CPNE9Q8IYJ1 553 aa21.25■□□□□ 0.99
SPAST-204ENST00000621856 MICALL1Q8N3F8 863 aa21.25■□□□□ 0.99
SPAST-204ENST00000621856 KIAA1191Q96A73 305 aa21.25■□□□□ 0.99
SPAST-204ENST00000621856 NECTIN4Q96NY8 510 aa21.25■□□□□ 0.99
SPAST-204ENST00000621856 COPS8Q99627 209 aa21.25■□□□□ 0.99
SPAST-204ENST00000621856 CDH19Q9H159 772 aa21.25■□□□□ 0.99
SPAST-204ENST00000621856 FAM83DQ9H4H8 585 aa21.25■□□□□ 0.99
SPAST-204ENST00000621856 ZDHHC4Q9NPG8 344 aa21.25■□□□□ 0.99
SPAST-204ENST00000621856 SUN2Q9UH99 717 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms