RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 VIPAS39Q9H9C1 493 aa16.06■□□□□ 0.16
CD40-207ENST00000620709 BAHCC1Q9P281 2608 aa16.06■□□□□ 0.16
CD40-207ENST00000620709 ENTPD2Q9Y5L3 495 aa16.06■□□□□ 0.16
CD40-207ENST00000620709 AGRPO00253 132 aa16.05■□□□□ 0.16
CD40-207ENST00000620709 TRAFD1O14545 582 aaPredicted RBP16.05■□□□□ 0.16
CD40-207ENST00000620709 MTSS1O43312 755 aa16.05■□□□□ 0.16
CD40-207ENST00000620709 PPFIA2O75334 1257 aa16.05■□□□□ 0.16
CD40-207ENST00000620709 SASH3O75995 380 aa16.05■□□□□ 0.16
CD40-207ENST00000620709 KELP23276 732 aa16.05■□□□□ 0.16
CD40-207ENST00000620709 BASP1P80723 227 aaKnown RBP16.05■□□□□ 0.16
CD40-207ENST00000620709 DHX9Q08211 1270 aaKnown RBP16.05■□□□□ 0.16
CD40-207ENST00000620709 SLMAPQ14BN4 828 aa16.05■□□□□ 0.16
CD40-207ENST00000620709 AGERQ15109 404 aa16.05■□□□□ 0.16
CD40-207ENST00000620709 BROXQ5VW32 411 aa16.05■□□□□ 0.16
CD40-207ENST00000620709 CEP128Q6ZU80 1094 aa16.05■□□□□ 0.16
CD40-207ENST00000620709 HOOK3Q86VS8 718 aa16.05■□□□□ 0.16
CD40-207ENST00000620709 PPIL6Q8IXY8 311 aa16.05■□□□□ 0.16
CD40-207ENST00000620709 PGBD5Q8N414 524 aa16.05■□□□□ 0.16
CD40-207ENST00000620709 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.05■□□□□ 0.16
CD40-207ENST00000620709 Q8N9G6 341 aaPredicted RBP16.05■□□□□ 0.16
CD40-207ENST00000620709 FAM46DQ8NEK8 389 aa16.05■□□□□ 0.16
CD40-207ENST00000620709 LRRN4Q8WUT4 740 aa16.05■□□□□ 0.16
CD40-207ENST00000620709 NUS1Q96E22 293 aa16.05■□□□□ 0.16
CD40-207ENST00000620709 UBL7Q96S82 380 aaPredicted RBP16.05■□□□□ 0.16
CD40-207ENST00000620709 WDR26Q9H7D7 661 aa16.05■□□□□ 0.16
CD40-207ENST00000620709 NOD2Q9HC29 1040 aa16.05■□□□□ 0.16
CD40-207ENST00000620709 CYP4F12Q9HCS2 524 aa16.05■□□□□ 0.16
CD40-207ENST00000620709 THSD1Q9NS62 852 aa16.05■□□□□ 0.16
CD40-207ENST00000620709 PMS2P1A4D2B8 440 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 B4DGG1 531 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 KLK10O43240 276 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 MAFKO60675 156 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 TCEA3O75764 348 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 VIPR1P32241 457 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 CCL7P80098 99 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 TLE3Q04726 772 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 MARC1Q5VT66 337 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 LVRNQ6Q4G3 990 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 ARHGEF18Q6ZSZ5 1173 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 LRRC49Q8IUZ0 686 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 SDR16C5Q8N3Y7 309 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 WDR48Q8TAF3 677 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 CCDC110Q8TBZ0 833 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 KCNE4Q8WWG9 221 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 CPT1BQ92523 772 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 SPATA13Q96N96 652 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 NUDCD1Q96RS6 583 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 FGF22Q9HCT0 170 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 NT5MQ9NPB1 228 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 RABGEF1Q9UJ41 708 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 LRP4O75096 1905 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 KIF26BQ2KJY2 2108 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 A0A1W2PNU3 283 aaPredicted RBP16.04■□□□□ 0.16
CD40-207ENST00000620709 RPLP0P05388 317 aaKnown RBP16.04■□□□□ 0.16
CD40-207ENST00000620709 CTPS1P17812 591 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 GM2AP17900 193 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 MMP13P45452 471 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 KIAA1024LP59773 190 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 ERVPABLB-1P60509 514 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 CNGA3Q16281 694 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 PNCKQ6P2M8 343 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 GPR155Q7Z3F1 870 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 CCDC13Q8IYE1 715 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 PELI3Q8N2H9 469 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 GFM1Q96RP9 751 aaKnown RBP16.04■□□□□ 0.16
CD40-207ENST00000620709 RBM15Q96T37 977 aaKnown RBP eCLIP16.04■□□□□ 0.16
CD40-207ENST00000620709 LGR4Q9BXB1 951 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 TXLNGYQ9BZA5 131 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 TMEM168Q9H0V1 697 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 DPEP2Q9H4A9 486 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 SEPT10Q9P0V9 454 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 TTLL3Q9Y4R7 772 aa16.04■□□□□ 0.16
CD40-207ENST00000620709 PTPRQQ9UMZ3 2332 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 A0A1W2PQ67 120 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 SOCS5O75159 536 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 DXOO77932 396 aaKnown RBP16.03■□□□□ 0.16
CD40-207ENST00000620709 TNFSF15O95150 251 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 PEX11BO96011 259 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 CYP2A6P11509 494 aaPredicted RBP16.03■□□□□ 0.16
CD40-207ENST00000620709 NFKBIAP25963 317 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 TRAF2Q12933 501 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 ARHGEF7Q14155 803 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 PTPRRQ15256 657 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 ANKRD20A2Q5SQ80 823 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 ANKRD20A1Q5TYW2 823 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 ANKRD20A3Q5VUR7 823 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 TIGD7Q6NT04 549 aaPredicted RBP16.03■□□□□ 0.16
CD40-207ENST00000620709 CCDC25Q86WR0 208 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 NAT8LQ8N9F0 302 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 WDR36Q8NI36 951 aaKnown RBP16.03■□□□□ 0.16
CD40-207ENST00000620709 GRAMD1AQ96CP6 724 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 HIC2Q96JB3 615 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 TSGA13Q96PP4 275 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 VAT1Q99536 393 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 CPNE5Q9HCH3 593 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 ASCL3Q9NQ33 180 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 RAB6BQ9NRW1 208 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 PHTF1Q9UMS5 762 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 DGKBQ9Y6T7 804 aa16.03■□□□□ 0.16
CD40-207ENST00000620709 FASNP49327 2511 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms