RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 CREB3L2Q70SY1 520 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 DDIASQ8IXT1 998 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 UNC5BQ8IZJ1 945 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 RDM1Q8NG50 284 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 DEPDC1BQ8WUY9 529 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 CIDECQ96AQ7 238 aaPredicted RBP10.32□□□□□ -0.76
VPS11-207ENST00000620429 INTS12Q96CB8 462 aaKnown RBP10.32□□□□□ -0.76
VPS11-207ENST00000620429 ZNF300Q96RE9 604 aaPredicted RBP10.32□□□□□ -0.76
VPS11-207ENST00000620429 RNPEPQ9H4A4 650 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 SPAG4Q9NPE6 437 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 HPS4Q9NQG7 708 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 CYTH4Q9UIA0 394 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 STOML2Q9UJZ1 356 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 KLF2Q9Y5W3 355 aaPredicted RBP10.32□□□□□ -0.76
VPS11-207ENST00000620429 CCDC85CA6NKD9 419 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 ZNF99A8MXY4 864 aaPredicted RBP10.31□□□□□ -0.76
VPS11-207ENST00000620429 AXIN1O15169 862 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 ARHGEF9O43307 516 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 SULT1B1O43704 296 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 CPNE3O75131 537 aaKnown RBP10.31□□□□□ -0.76
VPS11-207ENST00000620429 SNAP29O95721 258 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 TRUB2O95900 331 aaKnown RBP10.31□□□□□ -0.76
VPS11-207ENST00000620429 PSAPP07602 524 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 ACADMP11310 421 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 FCGR1AP12314 374 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 HOXB3P14651 431 aaPredicted RBP10.31□□□□□ -0.76
VPS11-207ENST00000620429 IL10P22301 178 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 NPY2RP49146 381 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 RGS7P49802 495 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 OAZ1P54368 228 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 RIN1Q13671 783 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 TFDP2Q14188 446 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 EMC2Q15006 297 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 GARNL3Q5VVW2 1013 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 NXNL2Q5VZ03 156 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 STRADAQ7RTN6 431 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 AMIGO1Q86WK6 493 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 FNDC5Q8NAU1 212 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 SMG8Q8ND04 991 aaKnown RBP10.31□□□□□ -0.76
VPS11-207ENST00000620429 FLCNQ8NFG4 579 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 OR4M1Q8NGD0 313 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 FAM110BQ8TC76 370 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 LRRN4Q8WUT4 740 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 MUS81Q96NY9 551 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 APBA2Q99767 749 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.31□□□□□ -0.76
VPS11-207ENST00000620429 ASPSCR1Q9BZE9 553 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 ROGDIQ9GZN7 287 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 WDR55Q9H6Y2 383 aaPredicted RBP10.31□□□□□ -0.76
VPS11-207ENST00000620429 FANCFQ9NPI8 374 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 SNX15Q9NRS6 342 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 TBC1D13Q9NVG8 400 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 WDR70Q9NW82 654 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 TAS2R9Q9NYW1 312 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 ZNF639Q9UID6 485 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 TRMT6Q9UJA5 497 aaKnown RBP10.31□□□□□ -0.76
VPS11-207ENST00000620429 ANAPC2Q9UJX6 822 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 PCDHGB1Q9Y5G3 927 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 RBP1P09455 135 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 GARSP41250 739 aaKnown RBP10.31□□□□□ -0.76
VPS11-207ENST00000620429 RAP1GAPP47736 663 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 STARD3Q14849 445 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 PLEKHG6Q3KR16 790 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 XRRA1Q6P2D8 792 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 CORO6Q6QEF8 472 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 CMTR2Q8IYT2 770 aaKnown RBP10.31□□□□□ -0.76
VPS11-207ENST00000620429 PCDH20Q8N6Y1 951 aaKnown RBP10.31□□□□□ -0.76
VPS11-207ENST00000620429 MCFD2Q8NI22 146 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 SLC22A17Q8WUG5 538 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 KCTD4Q8WVF5 259 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 BIRC7Q96CA5 298 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 LRRC39Q96DD0 335 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 HSFY1Q96LI6 401 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 PHOX2BQ99453 314 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 ING2Q9H160 280 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 TMEM181Q9P2C4 612 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 A3GALT2U3KPV4 340 aa10.31□□□□□ -0.76
VPS11-207ENST00000620429 DHRS12A0PJE2 317 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 PIK3R2O00459 728 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 TSPAN4O14817 238 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 ADAM11O75078 769 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 INMTO95050 263 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 CYP2A6P11509 494 aaPredicted RBP10.3□□□□□ -0.76
VPS11-207ENST00000620429 ITGA2P17301 1181 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 SHMT2P34897 504 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 TNFSF9P41273 254 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 CLK1P49759 484 aaKnown RBP10.3□□□□□ -0.76
VPS11-207ENST00000620429 HUNKP57058 714 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 PRKCDQ05655 676 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 STX5Q13190 355 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 SEMA3BQ13214 749 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 IKZF1Q13422 519 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 TNK1Q13470 666 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 INPP5AQ14642 412 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 ACOX1Q15067 660 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 PRSS42Q7Z5A4 293 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 THAP5Q7Z6K1 395 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 ZBTB33Q86T24 672 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 XYLT1Q86Y38 959 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 SLC22A15Q8IZD6 547 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms